| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453001
Identifier: 126453001
GI number: 126453001
Start: 3906146
End: 3907282
Strand: Reverse
Name: 126453001
Synonym: BURPS1106A_4003
Alternate gene names: NA
Gene position: 3907282-3906146 (Counterclockwise)
Preceding gene: 126452825
Following gene: 126452462
Centisome position: 97.96
GC content: 68.87
Gene sequence:
>1137_bases GTGACGGCGCAGGCCGTCCTGAAAGAGCGTAACCGCTTCTACGGCGGGGCGCCGACGGGCAAGTCGTACTACAGCATGCA CCCCGCGGGCGAGCGAAAGGACGTCGTGCACGTGCGCAAGGGGAGCGGCTATTTCGCGTACAAGCGCGGCGACGCCGGTC ACGGCGGCGCGGCCGAAGGCGAATCGCTGAACCATATCCTGTTCAAGGAAGCGCTCTGCAGCGTGTCGCACACGAAGCTC GTGTTGTACAGGCAGACGCCCGGCGCGCCGGCATTGTGGCGCCGCAAGGTGCCGATCACCGTGCAGGCCGCCCGAGCCGA AGAGCCGGTGCCGAGGCGCGACGGCCCGCCTTATCGCGCGGACGTCTACCTGGAGTTCGCCACGGACGACGATCTCGGCC TGAAGTGGCAGCGGAGAGTCTATATCGAGATCAGGCATGCACACGCGGTCGACGCGCGCAAGCAGGACGAATTGCGTACG CTGGGCATCCCGGTGGTCGAGGTGGACATCAATCATCCGGCATACATGTATCCGTTCAGCGACGACGAAACGACCGACGA ACGAGAAGACGCGCATCGCAAGCGGCTCAAGCACATGCTCGAGCATGAAAACGGATTCCTGCAAGGTGTCGTGTTGAGCA ATCCATCATCGAACGAATATTTGCAGAAGCTCGTCGGCGAGCAGCGGCGCAAGCTCGACTCGCAACAAGCCGAGCTCGAT CGGCTCGCCGCAGGCATCGCCGAGCGTGACGGCCGGTTGGCTGCGGCGGCCGAGGCGAAATTGCAGAGTGACCAACGGTG CCGGGATGCGCGGGCGGCGCTCGAGCGGGTGAGCGAGCAGTTGAGCGCGGTCTCCGACGAGCGCACGCGGGCGCTGCGCA AGCAGCAGGCACTGGCGGAACAACTGGCGCGCGTGCGGGCCGGGCGGCGCGTCGCCTACGGAGGATGCGCGGCCCTCGTC GCGCTGGCGGCCGTGCTCGGCTATGCGCACTGGCAACGGCCGCCGGCGCTGTCCGCCGCCCGGCCCGCGCCGTTGGCGCA AGCGCCGGCCGCGGCCGCGGGGGGCGCGCAGCGCGCGACCGGGCGCGCGGCGGCGTCGCCGAAACACCGAAGCCGCCCGC GCTCGAACGGCGGCTGA
Upstream 100 bases:
>100_bases TCGAGGCTGCGCGTCGCGACGGCCGCCGAGCCGGTGCGGGCAGGCGAGGGACGGCATGACCAAGAAACGGGCCTATACCA GCAAGACGGGGAATCAGACA
Downstream 100 bases:
>100_bases AGGCCGCGGCGCAACGGCGCGCGGCCTTTTCGCGTCAGCACTCGACGATATTCACCGCGAGCCCGCCGCGCGAGGTCTCC TTGTACTTCGTCTTCATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEGESLNHILFKEALCSVSHTKL VLYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIRHAHAVDARKQDELRT LGIPVVEVDINHPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLVGEQRRKLDSQQAELD RLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAEQLARVRAGRRVAYGGCAALV ALAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRATGRAAASPKHRSRPRSNGG
Sequences:
>Translated_378_residues MTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEGESLNHILFKEALCSVSHTKL VLYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIRHAHAVDARKQDELRT LGIPVVEVDINHPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLVGEQRRKLDSQQAELD RLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAEQLARVRAGRRVAYGGCAALV ALAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRATGRAAASPKHRSRPRSNGG >Mature_377_residues TAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEGESLNHILFKEALCSVSHTKLV LYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIRHAHAVDARKQDELRTL GIPVVEVDINHPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLVGEQRRKLDSQQAELDR LAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAEQLARVRAGRRVAYGGCAALVA LAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRATGRAAASPKHRSRPRSNGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41624; Mature: 41493
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEG CCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCC ESLNHILFKEALCSVSHTKLVLYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRA CCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCEE DVYLEFATDDDLGLKWQRRVYIEIRHAHAVDARKQDELRTLGIPVVEVDINHPAYMYPFS EEEEEEECCCCCCCEEEEEEEEEEECHHHHCCHHHHHHHHHCCEEEEEECCCCEEEECCC DDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLVGEQRRKLDSQQAELD CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH RLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLARVRAGRRVAYGGCAALVALAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRAT HHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHCC GRAAASPKHRSRPRSNGG CCCCCCCHHHCCCCCCCC >Mature Secondary Structure TAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEG CHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCC ESLNHILFKEALCSVSHTKLVLYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRA CCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCEE DVYLEFATDDDLGLKWQRRVYIEIRHAHAVDARKQDELRTLGIPVVEVDINHPAYMYPFS EEEEEEECCCCCCCEEEEEEEEEEECHHHHCCHHHHHHHHHCCEEEEEECCCCEEEECCC DDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLVGEQRRKLDSQQAELD CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH RLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLARVRAGRRVAYGGCAALVALAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRAT HHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHCC GRAAASPKHRSRPRSNGG CCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA