| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is ywrD [H]
Identifier: 126452986
GI number: 126452986
Start: 723372
End: 725045
Strand: Direct
Name: ywrD [H]
Synonym: BURPS1106A_0744
Alternate gene names: 126452986
Gene position: 723372-725045 (Clockwise)
Preceding gene: 126454740
Following gene: 126454959
Centisome position: 18.14
GC content: 71.09
Gene sequence:
>1674_bases ATGCCCGCGATGAATCTTCATTCGAACCTGTCCGGCGCGCCGTTCTCGTGGCGCAATCCGTATCCGACGACGCGCGTGCC GGTGTTCGCGCGCAACGTCGTGTCGACGTCGCATCCGCTCGCCGCGCAGGCGGGGCTCAGGATGCTGTGGAAGGGCGGCA ACGCCGTCGACGCGGCGATCGCCGCGGCGGCGGCGATCACCGTCGTCGAGCCGGTGTCGTGCGGCCTCGGCGGCGACGCG TTCGCGCTCGTCTGGGACGGCGCGAAGCTGCATGGCCTGAACGCGTCGGGCGTCGCGCCCGCCGCATGGAGTGTCGACTA TTTTCGCCGGCGGCACGGCGAGGCGGGCAACGGTCTCGCGCGGCAGCCGGTGCGCGGCTGGGACACGGTGACGGTGCCCG GCGTGATCGCCGGCTGGGAGGCGCTGCATGCGAAATTCGGCACGCTGCCGTTCGCCGATCTGCTCGAGCCGGCGATCGAG CTTGCCGAGCGCGGGCACGCGGTGGCCGCGGTGGTCGCGCACAAGTGGGCGGCCGCCGTGCCGGAGCTGAGCGGCCAGCC GGGCTTCGCTCAAACCTTCATGCCGCACGGCCGCGCGCCCGACGTGAGCGAGCGGGTGCGGCTGCCGGGCCATGCGAGGA CGCTGCGCACGATCGCGGCCGAAGGCGCGCGCGCGTTCTACGAAGGCAGCCTCGCCGAGTCGATCGCCGCGTTCTTCCGC GACGGCGGCGGCGCGCTCACCCTCGACGACCTGCGCGCGTACCGCCCCGAGTGGGTCGAGCCGATCGGCAAGGACTTCCG CGGCTACACGGTGCACGAGATTCCGCCGAACGGCCAGGGGATCGCCGCGCTGATCGCGCTCGGCATCGTCGAGCGCTTCG GCCTCGACGATTTGCCGCTCGATTCGGCGCAGGCGCAGCATGTGCAGATCGAGGCGATGAAGCTGGCGTTCGCCGACGTC TATCGCTACGTCGCCGATCCGCGTGCGATGGAACTCACGCCCGCGCAGATGCTCGACGACGCGTACCTCGCCGCGCGCGC GAAGCTGATCGACCCTCGGCGCGCGACGCATTTCTCGTTCGGCATGCCGCGCGCGGGCGGCACGATCTACCTGTCGGCGG CCGACGAGCGCGGGATGATGGTGAGCTTCATCCAGTCGAACTACATGGGTTTCGGCTCGGGCCTCGTGGTCCCGGGCACG GGGATTGCGCTGCAGAACCGCGGCTGCGGGTTCTCGATGGACCCGGCTTCGCCGAACGTCGTCGCGGGCGGCAAGCGGCC GTTCCACACGATCATTCCGGCGTTCGTCACGCAGCAGGCGGGCAGCGCGCGGCACGCGGTGATGAGCTTCGGCGTGATGG GCGGCGACATGCAGCCGCAAGGCCATCTGCAGACGATCGTGCGGATGCTCGGCTACGGCCAGCAGCCGCAGGCCGCGTGC GACGCGCCGCGCTGGAAGGTGAGCCGCTCGTTTACGCTTGATGTCGAGGCCACGTTCGATGCGTCCGTCGTCGAGGCGCT CGCCGCGCGCGGCCATACGATCCAGGCGATCGACGATCCGTACATGGACTTCGGCTCCGGCCAGTTCATCTGGCGGCTCG ATCGCGACGAGCCCGACCGCGGCTATGTCGCGGCGAGCGACAGCCGGCGCGACGGCCTCGCGGCCGGCTTCTGA
Upstream 100 bases:
>100_bases AGACTCGATTCATGTCTTGCGCGCATTCATTCATGTGGCAAATGAATTTGCGGGGACCGCGCGTTCGCGCTGGAATGTCC GTTTCGAACCTGTTTACAGT
Downstream 100 bases:
>100_bases CGCATGCCGGCGCGCAATGGATGCGCGTGGTTCGTTGCAGGCGAAACGATATCGAAAGGCATTTCAAAAGAGGCTTTCGA TATTGCTCGTCTTTTGGAAT
Product: putative gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MPAMNLHSNLSGAPFSWRNPYPTTRVPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEPVSCGLGGDA FALVWDGAKLHGLNASGVAPAAWSVDYFRRRHGEAGNGLARQPVRGWDTVTVPGVIAGWEALHAKFGTLPFADLLEPAIE LAERGHAVAAVVAHKWAAAVPELSGQPGFAQTFMPHGRAPDVSERVRLPGHARTLRTIAAEGARAFYEGSLAESIAAFFR DGGGALTLDDLRAYRPEWVEPIGKDFRGYTVHEIPPNGQGIAALIALGIVERFGLDDLPLDSAQAQHVQIEAMKLAFADV YRYVADPRAMELTPAQMLDDAYLAARAKLIDPRRATHFSFGMPRAGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGT GIALQNRGCGFSMDPASPNVVAGGKRPFHTIIPAFVTQQAGSARHAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAAC DAPRWKVSRSFTLDVEATFDASVVEALAARGHTIQAIDDPYMDFGSGQFIWRLDRDEPDRGYVAASDSRRDGLAAGF
Sequences:
>Translated_557_residues MPAMNLHSNLSGAPFSWRNPYPTTRVPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEPVSCGLGGDA FALVWDGAKLHGLNASGVAPAAWSVDYFRRRHGEAGNGLARQPVRGWDTVTVPGVIAGWEALHAKFGTLPFADLLEPAIE LAERGHAVAAVVAHKWAAAVPELSGQPGFAQTFMPHGRAPDVSERVRLPGHARTLRTIAAEGARAFYEGSLAESIAAFFR DGGGALTLDDLRAYRPEWVEPIGKDFRGYTVHEIPPNGQGIAALIALGIVERFGLDDLPLDSAQAQHVQIEAMKLAFADV YRYVADPRAMELTPAQMLDDAYLAARAKLIDPRRATHFSFGMPRAGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGT GIALQNRGCGFSMDPASPNVVAGGKRPFHTIIPAFVTQQAGSARHAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAAC DAPRWKVSRSFTLDVEATFDASVVEALAARGHTIQAIDDPYMDFGSGQFIWRLDRDEPDRGYVAASDSRRDGLAAGF >Mature_556_residues PAMNLHSNLSGAPFSWRNPYPTTRVPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEPVSCGLGGDAF ALVWDGAKLHGLNASGVAPAAWSVDYFRRRHGEAGNGLARQPVRGWDTVTVPGVIAGWEALHAKFGTLPFADLLEPAIEL AERGHAVAAVVAHKWAAAVPELSGQPGFAQTFMPHGRAPDVSERVRLPGHARTLRTIAAEGARAFYEGSLAESIAAFFRD GGGALTLDDLRAYRPEWVEPIGKDFRGYTVHEIPPNGQGIAALIALGIVERFGLDDLPLDSAQAQHVQIEAMKLAFADVY RYVADPRAMELTPAQMLDDAYLAARAKLIDPRRATHFSFGMPRAGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGTG IALQNRGCGFSMDPASPNVVAGGKRPFHTIIPAFVTQQAGSARHAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAACD APRWKVSRSFTLDVEATFDASVVEALAARGHTIQAIDDPYMDFGSGQFIWRLDRDEPDRGYVAASDSRRDGLAAGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=556, Percent_Identity=29.8561151079137, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI73915090, Length=556, Percent_Identity=29.8561151079137, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI73915096, Length=556, Percent_Identity=29.8561151079137, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI73915094, Length=556, Percent_Identity=29.8561151079137, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI113429324, Length=559, Percent_Identity=28.2647584973166, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI113429326, Length=564, Percent_Identity=27.8368794326241, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI153266885, Length=554, Percent_Identity=25.9927797833935, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI153266901, Length=555, Percent_Identity=26.1261261261261, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI109148539, Length=521, Percent_Identity=28.4069097888676, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI153266907, Length=552, Percent_Identity=25, Blast_Score=124, Evalue=3e-28, Organism=Escherichia coli, GI1789856, Length=553, Percent_Identity=29.8372513562387, Blast_Score=189, Evalue=3e-49, Organism=Caenorhabditis elegans, GI72000294, Length=513, Percent_Identity=25.9259259259259, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI212646519, Length=513, Percent_Identity=25.9259259259259, Blast_Score=128, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17542894, Length=559, Percent_Identity=25.2236135957066, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17506189, Length=535, Percent_Identity=24.4859813084112, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI193208245, Length=514, Percent_Identity=25.6809338521401, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI193208247, Length=514, Percent_Identity=25.6809338521401, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24642670, Length=569, Percent_Identity=26.5377855887522, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24642666, Length=569, Percent_Identity=26.5377855887522, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI45551474, Length=569, Percent_Identity=26.5377855887522, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI161077878, Length=569, Percent_Identity=26.5377855887522, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI161077880, Length=569, Percent_Identity=26.5377855887522, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI18859893, Length=530, Percent_Identity=27.5471698113208, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI18859741, Length=524, Percent_Identity=27.2900763358779, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI161077496, Length=516, Percent_Identity=26.7441860465116, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 59468; Mature: 59337
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAMNLHSNLSGAPFSWRNPYPTTRVPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAAI CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCEEECCCCHHHHHH AAAAAITVVEPVSCGLGGDAFALVWDGAKLHGLNASGVAPAAWSVDYFRRRHGEAGNGLA HHHHHHHEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCC RQPVRGWDTVTVPGVIAGWEALHAKFGTLPFADLLEPAIELAERGHAVAAVVAHKWAAAV CCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHC PELSGQPGFAQTFMPHGRAPDVSERVRLPGHARTLRTIAAEGARAFYEGSLAESIAAFFR CCCCCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DGGGALTLDDLRAYRPEWVEPIGKDFRGYTVHEIPPNGQGIAALIALGIVERFGLDDLPL CCCCEEEHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC DSAQAQHVQIEAMKLAFADVYRYVADPRAMELTPAQMLDDAYLAARAKLIDPRRATHFSF CCCCCCEEEHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEC GMPRAGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGCGFSMDPASPNV CCCCCCCEEEEEECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCE VAGGKRPFHTIIPAFVTQQAGSARHAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAAC EECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHH DAPRWKVSRSFTLDVEATFDASVVEALAARGHTIQAIDDPYMDFGSGQFIWRLDRDEPDR CCCCEEECCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCCC GYVAASDSRRDGLAAGF CEEEECCCCCCCCCCCC >Mature Secondary Structure PAMNLHSNLSGAPFSWRNPYPTTRVPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAAI CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCEEECCCCHHHHHH AAAAAITVVEPVSCGLGGDAFALVWDGAKLHGLNASGVAPAAWSVDYFRRRHGEAGNGLA HHHHHHHEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCC RQPVRGWDTVTVPGVIAGWEALHAKFGTLPFADLLEPAIELAERGHAVAAVVAHKWAAAV CCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHC PELSGQPGFAQTFMPHGRAPDVSERVRLPGHARTLRTIAAEGARAFYEGSLAESIAAFFR CCCCCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DGGGALTLDDLRAYRPEWVEPIGKDFRGYTVHEIPPNGQGIAALIALGIVERFGLDDLPL CCCCEEEHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC DSAQAQHVQIEAMKLAFADVYRYVADPRAMELTPAQMLDDAYLAARAKLIDPRRATHFSF CCCCCCEEEHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEC GMPRAGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGCGFSMDPASPNV CCCCCCCEEEEEECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCE VAGGKRPFHTIIPAFVTQQAGSARHAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAAC EECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHH DAPRWKVSRSFTLDVEATFDASVVEALAARGHTIQAIDDPYMDFGSGQFIWRLDRDEPDR CCCCEEECCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCCC GYVAASDSRRDGLAAGF CEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]