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The map label for this gene is 126452942

Identifier: 126452942

GI number: 126452942

Start: 1641769

End: 1643133

Strand: Direct

Name: 126452942

Synonym: BURPS1106A_1687

Alternate gene names: NA

Gene position: 1641769-1643133 (Clockwise)

Preceding gene: 126453297

Following gene: 126453533

Centisome position: 41.16

GC content: 70.62

Gene sequence:

>1365_bases
GTGAACGCGCGCGGGTTCGTGACGAAGTACGTGCTGACGGCATGCTGTGCCGCAGCGACGGCGCTCGCGGCGCAGCACGC
CGCCGCGCAGTCGGCTAAGAACCGGTCGGTGGCGACCGTCGACTACACGACGCGCAGCGGCGACACGCTGTACGACGTCT
CGGCCCGCTATCTGCAAGGCACGGACGACTGGCCGCTCGTCGCGCAACTGAACGACGTGCCGGTGCCGAAGCATCTGCAG
CCGGGCGTCGTGCTGAAGCTGCCCGCCGCGCGGCTGCGCAAGGAGCGGCTGTCGGCGCGGGTGATCGCCGCGCACGGCAC
GGTCGAGAGCGCGGGGCGCGGCTCCGCGCAGTTCGCGCCCGTCGCCGTCGACGCGACGCTCACGGAAGGCGACCGCCTGC
GCACGGGCTCGAACGCGTTCGTCACGCTCGAGCTCTCGGACGGCACGCACCTGAGCCTGCCGCCCGACAGCCAGATCGAT
CTCGCGACACTGCGTCGCACGGTGCTCACGGGCACGCTCGAGCGCGTGATCGATCTGCGCCGCGGCTCGGTCGACAGCGA
AGTCACCCATCTGAAGAAGAAGGACGATCGCTTCCAGATCCGCTCGCCGTCGGTCGTCGCCGGCGTGCGCGGCACGCGCT
TTCGCGTGAATTACGACAAGGATGGCCGCGCGTCGACGACGGTCGAAGTGCTCGACGGCACGGTGGGCGTCGCGCCGAGC
GCGAAGCGCTCGGCCGACACGCTCGTGCACGCGAACTTCGGCAACGTGACGAGCGCAAGCGGCGTCGTCGGCAGCCCGAT
CGCGCTGCTCGACGCGCCGCAGCTCGCCAACCCGGCGAAGATCCAGGACGATCCGCAGGTCGCGTTCGACCTCGTGCCGC
TCGGCGGCGCGCAAAGCTATCACGTGCAGATCGCGCGCGACGCGGGCCTGTACGATCTCTTCAAGGAAGTGCAGGTGTCG
GCGCCGCGCGCGACGTTCGCCGACGTGCCGGACGGCACCTATTTCGTCCGGATCGCGGCGATCGATTCGCACGGTCTCGA
GGGCCAGCCGCGCATCTACGCGTTCGAGCGGCGCCGCTTCGGGGTCGACGCGTCGGCCGCGCCCGCCGACGGCGGCTACG
CGTTCCGCTGGTCGACGACGCAAGACGGCGCGGCGGCCGGCGCGACGCGCTTTCGCTTCGTACTGTCGCGCTCGAAGGAC
CTGAGCAACCCGATCGTCGACCAGGTCGACGCGCAGGGCGGGCGCATCGCCGTGTCGAACCTGACGCCGGGCGACTACTA
CTGGAGCGTGATCGCGGAGCGCTACGAAGGCGGCCGTTTCCACGAAAAGGCCAGCGCGGTCAACGCGTTCACGATCGCGC
GCTGA

Upstream 100 bases:

>100_bases
TGCGCACGAAGCTCGGCCTGCGCCCGGAGAACGGCTACCGCCTCGCGCCGATCTACGGCTACGGCTATCGCCTCGAGCGC
GTGATGCAGGGGGACGCCGA

Downstream 100 bases:

>100_bases
TGGGCGGCGGATGAGATTCGACCGCACGCAACGGCGGCGGCTGCTCGGCCGCCGTTTTCTCGTCGAGTGGATCGCGATCG
GCTGCCTCGGGGTCGCGGTG

Product: lysM domain-containing protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MNARGFVTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPLVAQLNDVPVPKHLQ
PGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQID
LATLRRTVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
AKRSADTLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIARDAGLYDLFKEVQVS
APRATFADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKD
LSNPIVDQVDAQGGRIAVSNLTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR

Sequences:

>Translated_454_residues
MNARGFVTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPLVAQLNDVPVPKHLQ
PGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQID
LATLRRTVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
AKRSADTLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIARDAGLYDLFKEVQVS
APRATFADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKD
LSNPIVDQVDAQGGRIAVSNLTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR
>Mature_454_residues
MNARGFVTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPLVAQLNDVPVPKHLQ
PGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQID
LATLRRTVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
AKRSADTLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIARDAGLYDLFKEVQVS
APRATFADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKD
LSNPIVDQVDAQGGRIAVSNLTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48553; Mature: 48553

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARGFVTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECHHHEECC
TDDWPLVAQLNDVPVPKHLQPGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAP
CCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEE
VAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQIDLATLRRTVLTGTLERVIDLR
EEEEEEECCCCCEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
CCCCCHHHHHHHCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCC
AKRSADTLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSY
CCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEE
HVQIARDAGLYDLFKEVQVSAPRATFADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRF
EEEEECCCCHHHHHHHHHCCCCCCEECCCCCCEEEEEEEEEECCCCCCCCCEEEEECHHC
GVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKDLSNPIVDQVDAQGGRIAVSN
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHCCCCCEEEEEC
LTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR
CCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEECC
>Mature Secondary Structure
MNARGFVTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECHHHEECC
TDDWPLVAQLNDVPVPKHLQPGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAP
CCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEE
VAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQIDLATLRRTVLTGTLERVIDLR
EEEEEEECCCCCEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
CCCCCHHHHHHHCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCC
AKRSADTLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSY
CCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEE
HVQIARDAGLYDLFKEVQVSAPRATFADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRF
EEEEECCCCHHHHHHHHHCCCCCCEECCCCCCEEEEEEEEEECCCCCCCCCEEEEECHHC
GVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKDLSNPIVDQVDAQGGRIAVSN
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHCCCCCEEEEEC
LTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR
CCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA