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The map label for this gene is 126452903

Identifier: 126452903

GI number: 126452903

Start: 959804

End: 961000

Strand: Direct

Name: 126452903

Synonym: BURPS1106A_0976

Alternate gene names: NA

Gene position: 959804-961000 (Clockwise)

Preceding gene: 126452978

Following gene: 126451762

Centisome position: 24.06

GC content: 63.83

Gene sequence:

>1197_bases
TTGTTGAATTCCCTGCTCGATTTCCTTTCCAACGGGCTTCTGCGTTTCTCGTGGTGGCAGATCGTGCTGTTCACGCTCGC
CGTCACGCACGTGACGATCGTCGGCGTGACGGTCTATCTGCATCGCTGCCAGGCACACCGCGCGCTCGATCTGCATCCGA
TCATGAGCCACTTCTTCCGCGCCTGGCTGTGGATGACGACGGGCATGCTGACGGGCCAGTGGGCGGCGATCCATCGCAAG
CACCATGCGAAGTGCGAGACCGAGGAGGATCCGCACAGCCCGCAGACGCGCGGCATCTGGAAGGTGCTGCTCGAAGGCGC
CGAGCTGTATCGCGCGGAGGCGAAGAACGAGGAGACGATGCGCAAGTACGGCCACGGCACGCCGAACGACTGGCTCGAGC
GCAACGTCTACTCGAAATACCCGATTCTCGGCGTGAGCCTGATGATGGTGATCGACGTCGCGCTGTTCGGCCTCGTCGGC
CTCACCGTCTGGGCAGTCCAGATGGTATGGATCCCGTTCTGGGCGGCGGGCGTCGTCAACGGTCTCGGCCACTTCTGGGG
CTACCGCAACTTCAACGCGGCCGACGCGAGCACGAACCTGTTCCCGTGGGGCATCGTGATCGGCGGCGAGGAGCTGCACA
ACAATCATCATACGTTTGCGACGTCGGCGAAGCTGTCGAACAAGTGGTACGAGTTCGACATCGGCTGGATGTACATCCGC
ATCATGTCGGCGTTCGGGCTCGCGAAGGTAAAGAAGATCGCGCCGACGCCGCGGCTCGCCGCGCGCAAGACGGTGCTCGA
CCAGGAAACGCTGCAGGCCGTGCTGTCGAACCGTTACGAGGTGATGGCGCGCTATGCGAAGACGCTCAAGCGCGCGTACA
GGCAGGAGCTCGCGCACCTGAAGGAGCTGGGCGCGCGCGAGAAGTATCAGCTGATGCGCGGCGCGCGCAAATGGTTCCAC
AAGGACGAGGCGGGCCTCGACGAGCCGCAGAAGCGGATGCTGCCGGAGATCTTCGCGAACAGCCAGAAGCTGCACACGTT
CTTCCAACTGCGCGCCGAGCTCACGGCGATCTGGGAGCGCTCGAACGCCTCGCGCGAACAGTTGCTCACGCAGTTGCAGG
ACTGGTGCCATCGCGCCGAGCAAAGCGGCATCAAGGCGTTGCAGGAGTTCGCGACGCGCCTGCGCCGCTACGCGTGA

Upstream 100 bases:

>100_bases
ACGGATGAAGTAAAATTCCGTCCTACTGTGCGGTATGCTTTCATTTTCTTGACGCAGGTCATTTGAGCCGGCGTCCCTAA
CACTTCCACAGGTAACTGCC

Downstream 100 bases:

>100_bases
GTCGTGCGCGCCGAAATCGATTAGAATTTCAGGACGTCACAAACCCCGCGCTGGCGGGGTTTTTTCTTTTGGGCCGGCCG
TTCTTGCGATGCCGGCCGAT

Product: fatty acid desaturase family protein

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Stearoyl-CoA Desaturase; Acyl-CoA Desaturase; Delta-9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLNSLLDFLSNGLLRFSWWQIVLFTLAVTHVTIVGVTVYLHRCQAHRALDLHPIMSHFFRAWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVLLEGAELYRAEAKNEETMRKYGHGTPNDWLERNVYSKYPILGVSLMMVIDVALFGLVG
LTVWAVQMVWIPFWAAGVVNGLGHFWGYRNFNAADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKIAPTPRLAARKTVLDQETLQAVLSNRYEVMARYAKTLKRAYRQELAHLKELGAREKYQLMRGARKWFH
KDEAGLDEPQKRMLPEIFANSQKLHTFFQLRAELTAIWERSNASREQLLTQLQDWCHRAEQSGIKALQEFATRLRRYA

Sequences:

>Translated_398_residues
MLNSLLDFLSNGLLRFSWWQIVLFTLAVTHVTIVGVTVYLHRCQAHRALDLHPIMSHFFRAWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVLLEGAELYRAEAKNEETMRKYGHGTPNDWLERNVYSKYPILGVSLMMVIDVALFGLVG
LTVWAVQMVWIPFWAAGVVNGLGHFWGYRNFNAADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKIAPTPRLAARKTVLDQETLQAVLSNRYEVMARYAKTLKRAYRQELAHLKELGAREKYQLMRGARKWFH
KDEAGLDEPQKRMLPEIFANSQKLHTFFQLRAELTAIWERSNASREQLLTQLQDWCHRAEQSGIKALQEFATRLRRYA
>Mature_398_residues
MLNSLLDFLSNGLLRFSWWQIVLFTLAVTHVTIVGVTVYLHRCQAHRALDLHPIMSHFFRAWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVLLEGAELYRAEAKNEETMRKYGHGTPNDWLERNVYSKYPILGVSLMMVIDVALFGLVG
LTVWAVQMVWIPFWAAGVVNGLGHFWGYRNFNAADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKIAPTPRLAARKTVLDQETLQAVLSNRYEVMARYAKTLKRAYRQELAHLKELGAREKYQLMRGARKWFH
KDEAGLDEPQKRMLPEIFANSQKLHTFFQLRAELTAIWERSNASREQLLTQLQDWCHRAEQSGIKALQEFATRLRRYA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321383, Length=262, Percent_Identity=25.9541984732824, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46196; Mature: 46196

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA