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The map label for this gene is yktD [H]

Identifier: 126452896

GI number: 126452896

Start: 1504463

End: 1506277

Strand: Direct

Name: yktD [H]

Synonym: BURPS1106A_1556

Alternate gene names: 126452896

Gene position: 1504463-1506277 (Clockwise)

Preceding gene: 126452882

Following gene: 126453371

Centisome position: 37.72

GC content: 69.42

Gene sequence:

>1815_bases
TTGCTGTCGCCGTCGCAGCGCACCGATGGCGGCGCCCGTCTGTATGGGCGCGACGACCTGATTCGGCTGCATCGTATCGA
GGCGCTGAAACGGTTCGGGTATTCGCTGCCGGCCATCCAAGCCAGCCTGGATGGCCCGCCCGCCGGCGCGCCGCTGCAGA
TTCTGCGGCGCCAGATCGCGGCGCTCGACGCGCAGGCCGCGCGAGCGCAGCGCCTCAGTCGCCATCTGCAACACCTCGTC
GCCATGGTGGCCGCCGGCGGCGAGACGGCGGCGATCGACTGGCTGAACGTTTTGGAGCTGATGAACATGTACCAGAAACA
TCTCGACGACAACGAGCTCGACACGCTGCTTGCCTCCGGGCCGGATACGGTCGCGCCGATGGATCCGTCGTGGGTCGGCC
TCGTCGACGAGGTCCGCGACGCCATGCGGCGGGCGCTGCCGGCCGACAGCGACGCGGCCCAGGCGCTGGCCTGGCGTTGG
AGCCGGCTGATGAACCGAATGACCCGCAATGACCCGGCGCTCGCCGGCAAGCTGATGGGGATACAGCTCGGCGAGCCGCG
CGCTCAGCACATCGTGGGCATCACGCCGGCGATGTTGACGTGGATCGGCGAGGCGTGCGCGCACGCGCGCTGTACGCTGT
TCGCCAAGTATCTGAACCCGGCGCAGATCGCGGAGGTGCGGCGCCGCCAGCTCGCCGACACGCATATGCACGCCTGGCTC
GCGCTGGTGGCCGAGCTCAGGGCGCACATGGAGGCGGGCGTCGACGCGGGCGCCGCGCCGGTGCAGGCGATCGTCGCGCG
CTGGCAGCAGCTCTTTCGCGATAGCTTCTGCGGCGAGGACGAGGGCCTCGAGGCGAAGGTGCGCGATGCCTTGATGCGCG
AGCCGGACTTGCAACTCGGCGGCGGCTTCGATGAGGCATTGCTCGTCTATTTGAACAAGGCGCATATCGCCGGCCGCGAC
ATCGCGTCGGGCGATGACGGGCCCAAGCCGAGCGCGCTGATGGTGGCGAAGCAGCGCGCCGCGCACCAACTGCTCGACCA
GCCGCTGGTGCTCGACGATCCGATCGCGTTGAGCATTCTCGGCGCGGCCGAGGAACAGGCATTGCGCGCCGACCTCGACC
GATTCCGCTACCCGGCATCGTTGGGCATGCGCAGCTCGGTGGTCGTACGCAGCCGGCTCGCCGACGACATGCGGGCCGAG
GCCATCGGGCGCGGCGTGCGCCAGTATGTCGTCCTCGGCGCGGGGCTCGACACCAGCGCGTACCGGCATCCCGAGGCACC
GGGCCGCCTCTTCGAGGTCGACTTGCCGGCCACGCAAAGGTGGAAGCAGGCGCGCCTGCGCGAGGCCGGCATTGCGCCGC
CGCGTTCGCTGCGTTTCGTGCCGGTCGATTTCGAGCACGTGAGTCTTGCCGACGGGCTGGCGCGCGCCGGCTTCGATCCG
GGCGCGCCCGCCTTGTTCAGTTGGCTCGGTGTGACGATGTATCTGGACGAGGCCGCGGTCGTCGAGACATTGCGCTTCAT
CGCCGGCTGCGCCAAAGGCAGCGCCGTGCTGTTCGAATACGTGACGCCGCTGTCCGGCTTGCCTCCGATGATGCGCATTG
CGATGGAGCAGTTGACGGCGCAACTGGCCGCGCGCGGCGAGCCGTGGAAGTGCTTCTTCGAGCCGGCCGCGTTGGCCGAG
ATGCTGATCGGGCTGGGCTTCGGCAGCATCGGCGCCTGGAGCCCGGACGAGCTGAACCGACGTTATCTCGCGGACCGCGC
CGACGGGCTTCACATCGGCGCGACGCCGGCGCGCCTGATTCTGGCAACCGTCTAA

Upstream 100 bases:

>100_bases
TGATATCGACGACGGGGATCGCATGCGACTCAAAATCGGCGAACTGGCGAAGAAAGTGGGACTGAGCGTCAGGGCCCTGC
ATCACTATGACGCAATCGGT

Downstream 100 bases:

>100_bases
CGGCGCGTCCGGTTTCCCCGGGCGGCCGGTTCGGCCGCGGGCGCCGCCGGCCGGCGGGGCGAATCGCTATTTCGATGGCT
CCGGCTCGCGAATCACGCGA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MLSPSQRTDGGARLYGRDDLIRLHRIEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQAARAQRLSRHLQHLV
AMVAAGGETAAIDWLNVLELMNMYQKHLDDNELDTLLASGPDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRW
SRLMNRMTRNDPALAGKLMGIQLGEPRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWL
ALVAELRAHMEAGVDAGAAPVQAIVARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDEALLVYLNKAHIAGRD
IASGDDGPKPSALMVAKQRAAHQLLDQPLVLDDPIALSILGAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAE
AIGRGVRQYVVLGAGLDTSAYRHPEAPGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDP
GAPALFSWLGVTMYLDEAAVVETLRFIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAARGEPWKCFFEPAALAE
MLIGLGFGSIGAWSPDELNRRYLADRADGLHIGATPARLILATV

Sequences:

>Translated_604_residues
MLSPSQRTDGGARLYGRDDLIRLHRIEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQAARAQRLSRHLQHLV
AMVAAGGETAAIDWLNVLELMNMYQKHLDDNELDTLLASGPDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRW
SRLMNRMTRNDPALAGKLMGIQLGEPRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWL
ALVAELRAHMEAGVDAGAAPVQAIVARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDEALLVYLNKAHIAGRD
IASGDDGPKPSALMVAKQRAAHQLLDQPLVLDDPIALSILGAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAE
AIGRGVRQYVVLGAGLDTSAYRHPEAPGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDP
GAPALFSWLGVTMYLDEAAVVETLRFIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAARGEPWKCFFEPAALAE
MLIGLGFGSIGAWSPDELNRRYLADRADGLHIGATPARLILATV
>Mature_604_residues
MLSPSQRTDGGARLYGRDDLIRLHRIEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQAARAQRLSRHLQHLV
AMVAAGGETAAIDWLNVLELMNMYQKHLDDNELDTLLASGPDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRW
SRLMNRMTRNDPALAGKLMGIQLGEPRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWL
ALVAELRAHMEAGVDAGAAPVQAIVARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDEALLVYLNKAHIAGRD
IASGDDGPKPSALMVAKQRAAHQLLDQPLVLDDPIALSILGAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAE
AIGRGVRQYVVLGAGLDTSAYRHPEAPGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDP
GAPALFSWLGVTMYLDEAAVVETLRFIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAARGEPWKCFFEPAALAE
MLIGLGFGSIGAWSPDELNRRYLADRADGLHIGATPARLILATV

Specific function: May be involved in polyketide synthesis [H]

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011610
- InterPro:   IPR007213 [H]

Pfam domain/function: PF04072 LCM [H]

EC number: NA

Molecular weight: Translated: 65817; Mature: 65817

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPSQRTDGGARLYGRDDLIRLHRIEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIA
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHH
ALDAQAARAQRLSRHLQHLVAMVAAGGETAAIDWLNVLELMNMYQKHLDDNELDTLLASG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRWSRLMNRMTRNDPALAGKLMG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
IQLGEPRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWL
EECCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALVAELRAHMEAGVDAGAAPVQAIVARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
GGFDEALLVYLNKAHIAGRDIASGDDGPKPSALMVAKQRAAHQLLDQPLVLDDPIALSIL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHEEC
GAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAEAIGRGVRQYVVLGAGLDTSA
CHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
YRHPEAPGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDP
CCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCC
GAPALFSWLGVTMYLDEAAVVETLRFIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
QLAARGEPWKCFFEPAALAEMLIGLGFGSIGAWSPDELNRRYLADRADGLHIGATPARLI
HHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCHHHHH
LATV
EECC
>Mature Secondary Structure
MLSPSQRTDGGARLYGRDDLIRLHRIEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIA
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHH
ALDAQAARAQRLSRHLQHLVAMVAAGGETAAIDWLNVLELMNMYQKHLDDNELDTLLASG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRWSRLMNRMTRNDPALAGKLMG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
IQLGEPRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWL
EECCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALVAELRAHMEAGVDAGAAPVQAIVARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
GGFDEALLVYLNKAHIAGRDIASGDDGPKPSALMVAKQRAAHQLLDQPLVLDDPIALSIL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHEEC
GAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAEAIGRGVRQYVVLGAGLDTSA
CHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
YRHPEAPGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDP
CCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCC
GAPALFSWLGVTMYLDEAAVVETLRFIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
QLAARGEPWKCFFEPAALAEMLIGLGFGSIGAWSPDELNRRYLADRADGLHIGATPARLI
HHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCHHHHH
LATV
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377 [H]