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The map label for this gene is flgH [H]

Identifier: 126452858

GI number: 126452858

Start: 265996

End: 266718

Strand: Direct

Name: flgH [H]

Synonym: BURPS1106A_0284

Alternate gene names: 126452858

Gene position: 265996-266718 (Clockwise)

Preceding gene: 126454438

Following gene: 126451759

Centisome position: 6.67

GC content: 68.46

Gene sequence:

>723_bases
ATGAAGCAGGTTCGTTTCCTCCCGCAGCCGGCGCGCCGCGCGCGCGCGGCGGCCGTGCGCTGCCCGGGCGCCGCCGCGCT
CGCGGCCGCCGCGCTCGCGCTCGCGGGCTGCGCGCAGATTCCGCGCGAGCCGATCACGCAGCAGCCGATGTCGGCGATGC
CGCCGATGCCGCCCGCGATGCAGGCGCCGGGCTCGATCTACAACCCGGGCTACGCGGGCCGGCCGCTCTTCGAGGATCAG
CGCCCGCGCAACGTCGGCGACATCCTGACGATCGTGATCGCGGAGAACATCAACGCGACGAAGTCATCGGGCGCGAACAC
GAACCGGCAGGGCAACACGAGCTTCGACGTGCCGACCGCGGGCTTCCTGGGCGGCCTCTTCAACAAGGCGAACTTGTCCG
CGCAGGGCGCGAACAAGTTCGCGGCGACGGGCGGCGCGAGCGCGGCGAACACGTTCAACGGCACGATCACCGTGACGGTG
ACGAACGTGCTGCCGAACGGCAACCTCGTCGTGAGCGGCGAGAAGCAGATGCTGATCAACCAGGGCAACGAATTCGTGCG
CTTCTCGGGCATCGTCAATCCGAACACGATCTCGGGCCAGAACTCGGTGTACTCGACGCAGGTCGCGGACGCGCGCATCG
AGTATTCGGCGAAGGGCTACATCAACGAGGCCGAGACGATGGGCTGGCTGCAGCGTTTCTTCCTCAACATCGCGCCGTGG
TGA

Upstream 100 bases:

>100_bases
AGCGCGCGTACGAAATCAACAGCAAGGCCGTGACGACGTCCGACCAGATGCTGCAGACCGTCACGCAGATGTCGCGCTAA
CCGGCCCCGGGTCAGAAGCC

Downstream 100 bases:

>100_bases
AGACGATGCGTACCTTGTTCGCGCGCGTCGTGCGCCCCCTCGTTGCTGCGCGTCGCCGGGCGGCGGCGTGCTGCGCGCTC
GCCGCGTGCATGCTCGCGCT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKQVRFLPQPARRARAAAVRCPGAAALAAAALALAGCAQIPREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQ
RPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAGFLGGLFNKANLSAQGANKFAATGGASAANTFNGTITVTV
TNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAPW

Sequences:

>Translated_240_residues
MKQVRFLPQPARRARAAAVRCPGAAALAAAALALAGCAQIPREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQ
RPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAGFLGGLFNKANLSAQGANKFAATGGASAANTFNGTITVTV
TNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAPW
>Mature_240_residues
MKQVRFLPQPARRARAAAVRCPGAAALAAAALALAGCAQIPREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQ
RPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAGFLGGLFNKANLSAQGANKFAATGGASAANTFNGTITVTV
TNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAPW

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=216, Percent_Identity=58.3333333333333, Blast_Score=224, Evalue=4e-60,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25314; Mature: 25314

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVRFLPQPARRARAAAVRCPGAAALAAAALALAGCAQIPREPITQQPMSAMPPMPPAM
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHH
QAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTA
CCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
GFLGGLFNKANLSAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLIN
HHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEEC
QGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAPW
CCCCEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQVRFLPQPARRARAAAVRCPGAAALAAAALALAGCAQIPREPITQQPMSAMPPMPPAM
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHH
QAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTA
CCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
GFLGGLFNKANLSAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLIN
HHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEEC
QGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAPW
CCCCEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA