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The map label for this gene is ytfM [C]

Identifier: 126452849

GI number: 126452849

Start: 1027320

End: 1029137

Strand: Direct

Name: ytfM [C]

Synonym: BURPS1106A_1053

Alternate gene names: 126452849

Gene position: 1027320-1029137 (Clockwise)

Preceding gene: 126454878

Following gene: 126453209

Centisome position: 25.76

GC content: 68.54

Gene sequence:

>1818_bases
TTGGCAGGGCGGGCACCACGACAGCAGGTATTTTCGCGCGCCGCGCGCGGCGCGCCGAGCCGCTCGCCCGGATGGCACGC
CTTTGCGCGGCACGGGTTGCGCGTGCTGCTCGCGGGCTGCGCGGCCGTGCTCGCGGCGCCCGCGTTCGCGAAGTACGCGG
TCGAGATCGATGCGCCGCGCTCGGTCAGGAGCCTGCTCAAGCAGCACCTCGACATCGCCCGCTTCGCGAAGCGCGAGGAC
CTGAGCGAAGACCAGTTCGAATTTCTCGTGACCGCGACGCCGCAGCAGGTGCGCGAGCTCGCCGCGACGGCCGGCTATTT
CTCGCCCGTCGTGCGCACCGACGTGCGCACGACGGGTGGCGAGCGCCGCGTGACGGTGTCGGTCGATCCGGGCGCGCAGA
CGCTCGTGTCGGCGGTCGATCTGAAGTTCGACGGCCCGGTGGCGAGCGAGGACCCGAAGCAGGAGACGGCGACGCGCCTC
GCGTTCTCGCTGAAGCCGGGCGACCCGTTCACGCAGGCCGGCTGGGACGACGCGAAGAACGCCGCGCTCAAGCAGTTGCA
GTCGCGCCGCTATCTCGGCGCGAAGATCACCGCGTCGGAGGCGCGCATCGATCCGCGCACGCGAGCCGCGACGCTCGCGC
TGACGCTCGACAGCGGGCCGACGTTTACGATCGGCGCGCTCGACGTGTCGGGCGTGCGCCGCTATCCGGAAAAGATCGTG
CACGACGTGAATCCGCTGGCGGCGGGCGAGATCTACGACGCGAAACGCATCACCGAACTGCAGCGGCAGTTGCAGAACAC
GCCGTACTACGCGAGCGTGGCGATCGACGTCGCCGACGACGTCGCACGCCCGCTCGATTCGCCCATTCACGTGAAGGTCA
GCGAGTATCCGTACAACAGCGTGCGCGGCGGGATCGGCTACGCCACCGACACGGGGCCGCACATTCAGGGTTCCTATACG
TACCTCGACACGTTCGGCGCCGCGTGGCCGCTGTCGGTGTCGGGGCGGATCGACCAGATCCAGCAGTACGGCCAGGTCCA
GCTATCGATGCCGCCGGGGCCGCGCGCATGGACCAACAGCATCCTCGCGTCGTACACGAACACGAACGTGTCGGACACGC
GGATCTACAGCGCGCGCGTCGGCGCGCAGCGCACGCGCACCGGGCAGTTCATCGATTATTCGTATTCGCTGATGTTCTAC
CAGGACCGGCTCGACCAGAACGGCGCGGGCCCGACGACGAGCCGCGCGCTCGTGCCGCAATGGGCATGGACGCGCCGCAA
TGTCGACGATCCGCTGTTCCCGCGCTCGGGCAACCTGATTCACGCGGAAGCCGGCTTCGCGGTGAAGGGCGTGTTGACCG
ACCAGACGTTCATCCGCGGCTACGCACGCGGCCAGCAATACGTGCCGGTCGGCAAGCGCGACCTGTTCGTGTTCCGCGCG
GAGCTGGGCGGCGTGTTCACGAGCGGCGGCTCGTCGGGCATACCGGCGTCGCTGCTGTTCCGCGCCGGCGGCTCGAACTC
GGTGCGCGGCTACGGCTACCAGAGCATCGGCCACTCCGTCGACGGCTCGGTGCTGCCGACCAAGTATCTGATGACGGGCA
CGGCCGAATATCAGCACTGGTTCAATCGCGACTGGGGCGCGGCGACCTTCTTCGACATCGGCACCGCGACCGACGCATGG
GGCGAGAAGGTGTTCTATCCGGGCGCGGGCGTCGGCGTGCGCTGGCGCAGCCCCGTCGGCCCGGTCAATTTCGATCTCGC
TTACGGCTTGAAGAACAAGAGCGTGCGTCCGTATCTGACGCTCGGCATCGCATTCTGA

Upstream 100 bases:

>100_bases
GAGCGTCGTGCGCGAATGTGGCCGAAAGCGCGGTTCGTGCACCACGCTGTGTTCAAATGACGGCTTTGATCCGACGAAAT
TCTTACAACGGAGGTCTTGT

Downstream 100 bases:

>100_bases
TTTTTCATTTGGCATGACGAAGGACGTATCCGAACCGACTCCTCCCCATGCGCCGGACGGCGGCGCGCCCGGCGGCCCGC
GCGAGCCCGCGCCGAAGCCG

Product: OMP85 family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MAGRAPRQQVFSRAARGAPSRSPGWHAFARHGLRVLLAGCAAVLAAPAFAKYAVEIDAPRSVRSLLKQHLDIARFAKRED
LSEDQFEFLVTATPQQVRELAATAGYFSPVVRTDVRTTGGERRVTVSVDPGAQTLVSAVDLKFDGPVASEDPKQETATRL
AFSLKPGDPFTQAGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRAATLALTLDSGPTFTIGALDVSGVRRYPEKIV
HDVNPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVADDVARPLDSPIHVKVSEYPYNSVRGGIGYATDTGPHIQGSYT
YLDTFGAAWPLSVSGRIDQIQQYGQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRTRTGQFIDYSYSLMFY
QDRLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVPVGKRDLFVFRA
ELGGVFTSGGSSGIPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAW
GEKVFYPGAGVGVRWRSPVGPVNFDLAYGLKNKSVRPYLTLGIAF

Sequences:

>Translated_605_residues
MAGRAPRQQVFSRAARGAPSRSPGWHAFARHGLRVLLAGCAAVLAAPAFAKYAVEIDAPRSVRSLLKQHLDIARFAKRED
LSEDQFEFLVTATPQQVRELAATAGYFSPVVRTDVRTTGGERRVTVSVDPGAQTLVSAVDLKFDGPVASEDPKQETATRL
AFSLKPGDPFTQAGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRAATLALTLDSGPTFTIGALDVSGVRRYPEKIV
HDVNPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVADDVARPLDSPIHVKVSEYPYNSVRGGIGYATDTGPHIQGSYT
YLDTFGAAWPLSVSGRIDQIQQYGQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRTRTGQFIDYSYSLMFY
QDRLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVPVGKRDLFVFRA
ELGGVFTSGGSSGIPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAW
GEKVFYPGAGVGVRWRSPVGPVNFDLAYGLKNKSVRPYLTLGIAF
>Mature_604_residues
AGRAPRQQVFSRAARGAPSRSPGWHAFARHGLRVLLAGCAAVLAAPAFAKYAVEIDAPRSVRSLLKQHLDIARFAKREDL
SEDQFEFLVTATPQQVRELAATAGYFSPVVRTDVRTTGGERRVTVSVDPGAQTLVSAVDLKFDGPVASEDPKQETATRLA
FSLKPGDPFTQAGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRAATLALTLDSGPTFTIGALDVSGVRRYPEKIVH
DVNPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVADDVARPLDSPIHVKVSEYPYNSVRGGIGYATDTGPHIQGSYTY
LDTFGAAWPLSVSGRIDQIQQYGQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRTRTGQFIDYSYSLMFYQ
DRLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVPVGKRDLFVFRAE
LGGVFTSGGSSGIPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWG
EKVFYPGAGVGVRWRSPVGPVNFDLAYGLKNKSVRPYLTLGIAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=524, Percent_Identity=25.9541984732824, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 65959; Mature: 65828

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRAPRQQVFSRAARGAPSRSPGWHAFARHGLRVLLAGCAAVLAAPAFAKYAVEIDAPR
CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECCCH
SVRSLLKQHLDIARFAKREDLSEDQFEFLVTATPQQVRELAATAGYFSPVVRTDVRTTGG
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
ERRVTVSVDPGAQTLVSAVDLKFDGPVASEDPKQETATRLAFSLKPGDPFTQAGWDDAKN
CEEEEEEECCCHHHHHHHHEEEECCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCHHHH
AALKQLQSRRYLGAKITASEARIDPRTRAATLALTLDSGPTFTIGALDVSGVRRYPEKIV
HHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHH
HDVNPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVADDVARPLDSPIHVKVSEYPYNS
HCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHCCCCEEEEEECCCCHH
VRGGIGYATDTGPHIQGSYTYLDTFGAAWPLSVSGRIDQIQQYGQVQLSMPPGPRAWTNS
HCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHCCCEEEECCCCCCHHHHH
ILASYTNTNVSDTRIYSARVGAQRTRTGQFIDYSYSLMFYQDRLDQNGAGPTTSRALVPQ
HHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEHHCCCCCCCCCCCCCCCCC
WAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVPVGKRDLFVFRA
CHHHCCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHCCCEECCCCCCEEEEEEE
ELGGVFTSGGSSGIPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHW
CCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHEEECCHHHHHH
FNRDWGAATFFDIGTATDAWGEKVFYPGAGVGVRWRSPVGPVNFDLAYGLKNKSVRPYLT
HCCCCCCEEEEECCCCCCCCCCEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEE
LGIAF
EEECC
>Mature Secondary Structure 
AGRAPRQQVFSRAARGAPSRSPGWHAFARHGLRVLLAGCAAVLAAPAFAKYAVEIDAPR
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECCCH
SVRSLLKQHLDIARFAKREDLSEDQFEFLVTATPQQVRELAATAGYFSPVVRTDVRTTGG
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
ERRVTVSVDPGAQTLVSAVDLKFDGPVASEDPKQETATRLAFSLKPGDPFTQAGWDDAKN
CEEEEEEECCCHHHHHHHHEEEECCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCHHHH
AALKQLQSRRYLGAKITASEARIDPRTRAATLALTLDSGPTFTIGALDVSGVRRYPEKIV
HHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHH
HDVNPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVADDVARPLDSPIHVKVSEYPYNS
HCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHCCCCEEEEEECCCCHH
VRGGIGYATDTGPHIQGSYTYLDTFGAAWPLSVSGRIDQIQQYGQVQLSMPPGPRAWTNS
HCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHCCCEEEECCCCCCHHHHH
ILASYTNTNVSDTRIYSARVGAQRTRTGQFIDYSYSLMFYQDRLDQNGAGPTTSRALVPQ
HHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEHHCCCCCCCCCCCCCCCCC
WAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVPVGKRDLFVFRA
CHHHCCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHCCCEECCCCCCEEEEEEE
ELGGVFTSGGSSGIPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHW
CCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHEEECCHHHHHH
FNRDWGAATFFDIGTATDAWGEKVFYPGAGVGVRWRSPVGPVNFDLAYGLKNKSVRPYLT
HCCCCCCEEEEECCCCCCCCCCEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEE
LGIAF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]