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The map label for this gene is amaB [H]

Identifier: 126452829

GI number: 126452829

Start: 1134578

End: 1135840

Strand: Direct

Name: amaB [H]

Synonym: BURPS1106A_1155

Alternate gene names: 126452829

Gene position: 1134578-1135840 (Clockwise)

Preceding gene: 126453000

Following gene: 126455263

Centisome position: 28.45

GC content: 73.56

Gene sequence:

>1263_bases
ATGATGGCTTCGGCACTGGGCGGGCCGACGCTCGCGATCGACGGCGAGCGGCTGTGGCGCTCGCTCATGGAGATGGCGCG
CATCGGCGGCACCGCGCACGGCGGCGTGCGGCGGCTTGCCGCGACCGACGACGACCGGCGCGGGCGCGACCGGTTCGCGC
AGTGGTGTCGCGAAGCGGGCCTCGCGCTCAGCGTCGACGAGATCGGCAATCTGTTCGCGCGCCGCGCGGGCGCGGAGGCC
GGCGCGCCGCCCGTGCTGATCGGCAGCCATCTCGACACGCAGCCGGAAGGCGGCCGCTTCGACGGCACTTACGGCGTGCT
CGCGGCGCTCGAAGTCGTGCGCAGCCTGAACGATGCGGGGATCGTCACGCGCAAGCCGATCGAGATCGTATCGTGGACGA
ACGAGGAGGGCGCGCGCTTCGCGCCGGCGATGCTCGGCTCGGCGGTCGCGGCGGGCGTGATGCCGCTCGCGCAGGCGCTC
GCGGTGCGCGACGCCGCGGGCGTGACGCTCGGCGACGCGCTCGAGCGGATCGGCTATCGCGGCGCGCGGCGCGCGGTGCG
TCCGGCGATCGATGCGTACTTCGAAGCGCATATCGAACAGGGGCCGGTGCTGGAGGCGAACGGCGTGGAGATCGGCGTCG
TCACGGGCGGGCAGGCGATTCGCTGGCTCGACGTGACGATCGCCGGGCAGCCCGCGCACGCGGGCACGACGCCGGTCGCG
CATCGCCGCGACGCGCTGTTCGGCTTCGCGCAGATCGCGGACGCGATCGAACGGATGCTGGCCGAGTTCGCGCCGCACGG
CCTGGCGACGATCGGCTGCGTCGAGATTCCGAACGCGTCGCGCAACACGATCGCGGGCGCGGTTGCGTTCACGCTCGATC
TGCGCCATCCGGACGACGCGACGCTCGATGCGATGGCGCGCGCGGCGACCGACGCCTGCGCGCGCATCGCCGCGCGGCGC
GGCTTGCGCGCCGACGTCTCGACGCATTGGGCGAGCCCGTCGACGCGGTTCGACGCGGCTTGCATCGCGAGCGTCGAGGC
GGCCGCGGCACGCTTCGGCTATCGGCATGAGCGGATCGTGAGCGGCGCCGGACACGACGCGATCCATCTGGCCAAGCACG
GCCCGGGCGCGATGGTGTTCATTCCGTGTGTCGGCGGACTGTCGCACAACGAAGCCGAGGCCGTGCTGCCCGCCGACGCG
ACGCGCGGCGCGAACGTGCTGCTCGGCGCGGTGCTCGATCGAGCGGGCCGTGCCGCTCGATGA

Upstream 100 bases:

>100_bases
ACGTGTCTCGCGGGGCTCTCGCTCGTGAGCGTCGTCGCGCTCGACGCGCGCCGCGCCGCGCGAGGCGCTTCGGGCCGCGA
AGCGCTGGAGGCGCGCTGAC

Downstream 100 bases:

>100_bases
GCGGGCCGCGCGGATGGCGGCGGCGTGGGCGTGCGAGCGGCGGCGCGCCGGATCGATCGGCTTTCGCCGCGGCGGCGAGC
GCCGAATCCCGGTGACGTCG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MMASALGGPTLAIDGERLWRSLMEMARIGGTAHGGVRRLAATDDDRRGRDRFAQWCREAGLALSVDEIGNLFARRAGAEA
GAPPVLIGSHLDTQPEGGRFDGTYGVLAALEVVRSLNDAGIVTRKPIEIVSWTNEEGARFAPAMLGSAVAAGVMPLAQAL
AVRDAAGVTLGDALERIGYRGARRAVRPAIDAYFEAHIEQGPVLEANGVEIGVVTGGQAIRWLDVTIAGQPAHAGTTPVA
HRRDALFGFAQIADAIERMLAEFAPHGLATIGCVEIPNASRNTIAGAVAFTLDLRHPDDATLDAMARAATDACARIAARR
GLRADVSTHWASPSTRFDAACIASVEAAAARFGYRHERIVSGAGHDAIHLAKHGPGAMVFIPCVGGLSHNEAEAVLPADA
TRGANVLLGAVLDRAGRAAR

Sequences:

>Translated_420_residues
MMASALGGPTLAIDGERLWRSLMEMARIGGTAHGGVRRLAATDDDRRGRDRFAQWCREAGLALSVDEIGNLFARRAGAEA
GAPPVLIGSHLDTQPEGGRFDGTYGVLAALEVVRSLNDAGIVTRKPIEIVSWTNEEGARFAPAMLGSAVAAGVMPLAQAL
AVRDAAGVTLGDALERIGYRGARRAVRPAIDAYFEAHIEQGPVLEANGVEIGVVTGGQAIRWLDVTIAGQPAHAGTTPVA
HRRDALFGFAQIADAIERMLAEFAPHGLATIGCVEIPNASRNTIAGAVAFTLDLRHPDDATLDAMARAATDACARIAARR
GLRADVSTHWASPSTRFDAACIASVEAAAARFGYRHERIVSGAGHDAIHLAKHGPGAMVFIPCVGGLSHNEAEAVLPADA
TRGANVLLGAVLDRAGRAAR
>Mature_420_residues
MMASALGGPTLAIDGERLWRSLMEMARIGGTAHGGVRRLAATDDDRRGRDRFAQWCREAGLALSVDEIGNLFARRAGAEA
GAPPVLIGSHLDTQPEGGRFDGTYGVLAALEVVRSLNDAGIVTRKPIEIVSWTNEEGARFAPAMLGSAVAAGVMPLAQAL
AVRDAAGVTLGDALERIGYRGARRAVRPAIDAYFEAHIEQGPVLEANGVEIGVVTGGQAIRWLDVTIAGQPAHAGTTPVA
HRRDALFGFAQIADAIERMLAEFAPHGLATIGCVEIPNASRNTIAGAVAFTLDLRHPDDATLDAMARAATDACARIAARR
GLRADVSTHWASPSTRFDAACIASVEAAAARFGYRHERIVSGAGHDAIHLAKHGPGAMVFIPCVGGLSHNEAEAVLPADA
TRGANVLLGAVLDRAGRAAR

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=390, Percent_Identity=31.5384615384615, Blast_Score=188, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 43817; Mature: 43817

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMASALGGPTLAIDGERLWRSLMEMARIGGTAHGGVRRLAATDDDRRGRDRFAQWCREAG
CCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCC
LALSVDEIGNLFARRAGAEAGAPPVLIGSHLDTQPEGGRFDGTYGVLAALEVVRSLNDAG
CEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
IVTRKPIEIVSWTNEEGARFAPAMLGSAVAAGVMPLAQALAVRDAAGVTLGDALERIGYR
CEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
GARRAVRPAIDAYFEAHIEQGPVLEANGVEIGVVTGGQAIRWLDVTIAGQPAHAGTTPVA
HHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCC
HRRDALFGFAQIADAIERMLAEFAPHGLATIGCVEIPNASRNTIAGAVAFTLDLRHPDDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEEEEEEEEECCCCCCH
TLDAMARAATDACARIAARRGLRADVSTHWASPSTRFDAACIASVEAAAARFGYRHERIV
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
SGAGHDAIHLAKHGPGAMVFIPCVGGLSHNEAEAVLPADATRGANVLLGAVLDRAGRAAR
CCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMASALGGPTLAIDGERLWRSLMEMARIGGTAHGGVRRLAATDDDRRGRDRFAQWCREAG
CCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCC
LALSVDEIGNLFARRAGAEAGAPPVLIGSHLDTQPEGGRFDGTYGVLAALEVVRSLNDAG
CEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
IVTRKPIEIVSWTNEEGARFAPAMLGSAVAAGVMPLAQALAVRDAAGVTLGDALERIGYR
CEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
GARRAVRPAIDAYFEAHIEQGPVLEANGVEIGVVTGGQAIRWLDVTIAGQPAHAGTTPVA
HHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCC
HRRDALFGFAQIADAIERMLAEFAPHGLATIGCVEIPNASRNTIAGAVAFTLDLRHPDDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEEEEEEEEECCCCCCH
TLDAMARAATDACARIAARRGLRADVSTHWASPSTRFDAACIASVEAAAARFGYRHERIV
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
SGAGHDAIHLAKHGPGAMVFIPCVGGLSHNEAEAVLPADATRGANVLLGAVLDRAGRAAR
CCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]