| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yfcG [H]
Identifier: 126452802
GI number: 126452802
Start: 1945703
End: 1946407
Strand: Reverse
Name: yfcG [H]
Synonym: BURPS1106A_1980
Alternate gene names: 126452802
Gene position: 1946407-1945703 (Counterclockwise)
Preceding gene: 126454207
Following gene: 126454615
Centisome position: 48.8
GC content: 65.53
Gene sequence:
>705_bases ATGTCCGATCTTTCCGAATTTCCGATCACGAAGAAATGGCCCGCGCAGCATCCGGAGCGCATCCAGCTCTATTCGCTACC GACGCCGAACGGCGTCAAGGTATCGATCCTGCTCGAGGAAACGGAGCTGCCGTACGAGGCGCACGTCGTGCGCTTCGACA CGAACGATCAGATGTCGCCCGAGTTCCTGTCGCTGAACCCGAACAACAAGATTCCGGCGATCATCGATCCGCACGGCCCG GGCGGCAAGCCGCTCGCGCTGTTCGAATCGGGCGCGATCCTGCTGTATCTCGCCGAGAAGACGGGCCGGTTCATCCCGGC CGATCCCGCGCGCCGCTACGAGACGATCCAGTGGCTGATGTTCCAGATGGGCGGCATCGGGCCGATGTTCGGCCAGCTCG GCTTCTTCCACAAGTTCGCGGGCCGCGAGTACGAGGACAAACGCCCGCGCGAGCGCTACGTCGGCGAGGCGAAGCGCCTG CTCGGCGTGCTTGACGGCCGCCTCGCGCATCGCCGGTGGATCATGGACGACGCCTATACGATCGCCGACATCGCGACGTT CCCGTGGGTGCGCAACCTGATCGGCTTCTACGAGGCGCGCGAGCTCGTCGAATTCGATCGCTATCCGAACGTGGCGCGCG CGCTCGACGCGTTCGTCGCGCGGCCGGCGGTGGCGCGCGGATTGAACATTCCGGCGCGGCCGTAG
Upstream 100 bases:
>100_bases ACGCGCGGGATCGGCTACATTGTGCGGACCGCGCCGCCCGGCGAAGCCCGCCCGTGGGCGCGTCGCGTTTTCTTCACCGA TTCATCGACCGAGCCCATCC
Downstream 100 bases:
>100_bases GCGCGGCGTTTCGGTTTCTGTCGTTTCTTTCCGTCGCGCTCCGACGTCCACCGTGCGGCGTTTCGCCGCGCCGCGTCGCG CGTGCGGCGCGACGCTTGCC
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSDLSEFPITKKWPAQHPERIQLYSLPTPNGVKVSILLEETELPYEAHVVRFDTNDQMSPEFLSLNPNNKIPAIIDPHGP GGKPLALFESGAILLYLAEKTGRFIPADPARRYETIQWLMFQMGGIGPMFGQLGFFHKFAGREYEDKRPRERYVGEAKRL LGVLDGRLAHRRWIMDDAYTIADIATFPWVRNLIGFYEARELVEFDRYPNVARALDAFVARPAVARGLNIPARP
Sequences:
>Translated_234_residues MSDLSEFPITKKWPAQHPERIQLYSLPTPNGVKVSILLEETELPYEAHVVRFDTNDQMSPEFLSLNPNNKIPAIIDPHGP GGKPLALFESGAILLYLAEKTGRFIPADPARRYETIQWLMFQMGGIGPMFGQLGFFHKFAGREYEDKRPRERYVGEAKRL LGVLDGRLAHRRWIMDDAYTIADIATFPWVRNLIGFYEARELVEFDRYPNVARALDAFVARPAVARGLNIPARP >Mature_233_residues SDLSEFPITKKWPAQHPERIQLYSLPTPNGVKVSILLEETELPYEAHVVRFDTNDQMSPEFLSLNPNNKIPAIIDPHGPG GKPLALFESGAILLYLAEKTGRFIPADPARRYETIQWLMFQMGGIGPMFGQLGFFHKFAGREYEDKRPRERYVGEAKRLL GVLDGRLAHRRWIMDDAYTIADIATFPWVRNLIGFYEARELVEFDRYPNVARALDAFVARPAVARGLNIPARP
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=210, Percent_Identity=45.7142857142857, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI87082195, Length=222, Percent_Identity=44.5945945945946, Blast_Score=165, Evalue=2e-42, Organism=Escherichia coli, GI87081789, Length=206, Percent_Identity=29.126213592233, Blast_Score=66, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=267, Percent_Identity=32.2097378277154, Blast_Score=107, Evalue=2e-24, Organism=Drosophila melanogaster, GI17864592, Length=200, Percent_Identity=27, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864598, Length=167, Percent_Identity=32.3353293413174, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI17864594, Length=205, Percent_Identity=29.7560975609756, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571670, Length=179, Percent_Identity=26.8156424581006, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 26682; Mature: 26551
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSEFPITKKWPAQHPERIQLYSLPTPNGVKVSILLEETELPYEAHVVRFDTNDQMSP CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCC EFLSLNPNNKIPAIIDPHGPGGKPLALFESGAILLYLAEKTGRFIPADPARRYETIQWLM CEEEECCCCCCCEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHH FQMGGIGPMFGQLGFFHKFAGREYEDKRPRERYVGEAKRLLGVLDGRLAHRRWIMDDAYT HHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IADIATFPWVRNLIGFYEARELVEFDRYPNVARALDAFVARPAVARGLNIPARP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCC >Mature Secondary Structure SDLSEFPITKKWPAQHPERIQLYSLPTPNGVKVSILLEETELPYEAHVVRFDTNDQMSP CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCC EFLSLNPNNKIPAIIDPHGPGGKPLALFESGAILLYLAEKTGRFIPADPARRYETIQWLM CEEEECCCCCCCEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHH FQMGGIGPMFGQLGFFHKFAGREYEDKRPRERYVGEAKRLLGVLDGRLAHRRWIMDDAYT HHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IADIATFPWVRNLIGFYEARELVEFDRYPNVARALDAFVARPAVARGLNIPARP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]