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The map label for this gene is sufB [C]

Identifier: 126452794

GI number: 126452794

Start: 2724538

End: 2725992

Strand: Direct

Name: sufB [C]

Synonym: BURPS1106A_2760

Alternate gene names: 126452794

Gene position: 2724538-2725992 (Clockwise)

Preceding gene: 126452236

Following gene: 126453548

Centisome position: 68.31

GC content: 66.6

Gene sequence:

>1455_bases
ATGCTCAACGTCGATCAACCCACGCCGCTCGCCAGAGCGCTCGAACAAACGTACCGGCACGGCTTCGTGACCGATATCGA
ATCCGATTCGCTACCGCCGGGCCTCGACGAGGGCGTCGTTCGGGAGATCTCGCGCCGCAAGCGCGAACCGGCGTTCCTGC
TGAAATGGCGGCTCGCCGCATTCGAGCGCTGGCTCGCGATGTCGCCGCCCGATTGGGGCAAGCTGCGCATCGCGCCGATC
GATTTCCAGGCGCAGTCGTACTACTCGGCGCCGAAATCGCTGAAGGATCAGCCAAAGAGCCTCGACGAAGTCGACCCGAA
GCTGCTCGAAACCTACGAAAAGCTGAACGTGCCGCTGCACGAGCGCGCCCGGCTCGCGGGCGTCGCGGTGGACGCCGTGT
TCGATTCGGTATCGGTCGGCACGACGTTTCGCGAGCAGCTCGCCGCAGCGGGCGTGATCTTCTGCTCGTTCTCGCACGCG
GTCGAGCATCACCCCGAACTGATCGAGCGCTACCTCGGCACCGTCGTGCCGCCCGCCGACAATTTCTATGCGGCGCTGAA
CTCGGCCGTGTTCTCCGACGGCTCGTTCGTCTACGTGCCGCAAGGCGTGCGCTGCCCGATGGAGCTCTCGTCGTACTTCC
GGATCAACGCGCAAAACACCGGCCAGTTCGAGCGCACGCTGATCATCGCGGAGCCCGGCAGCCACGTCGGCTATCTCGAA
GGCTGCACCGCGCCGCAGCGCGACGAGCATCAGCTGCACGCGGCCGTCGTCGAGCTCGTCGCGCACGACGACGCGCACAT
CAAGTACTCGACCGTGCAGAACTGGTATCCGGGCGACGCGGACGGCGTGGGCGGCATCTACAACTTCGTGACCAAGCGCG
GCCTGTGCGCGGGCGCGCGCTCGCGGATCGCGTGGACGCAGATCGAGACGGGTTCCGCGATCACGTGGAAATATCCGAGC
GTCGTGCTGCGCGGCGACGAATCGAGCGGCGAGTTCCATTCGATCGCCGTATCGAACCACTGCCAGCAGGCCGACACCGG
CACGAAGATGATCCATCTCGGCCGCAACACGCGCAGCCGGATCGTCTCGAAAGGCATCAGCGCGGGCCGCGCGCAGAACA
GCTATCGCGGGCTCGTGCGCGTCGCGCGCACCGCCGAAGGCGCGCGCAACCATACGCAGTGCGATTCGCTGCTGATCGGC
CCGCAATGCGGCGCGCATACGTTTCCGTATGTCGAGAGCGCGCGCGGCGACGCCGTCGTCGAGCACGAGGCGACGACGAC
GCGCATCTCCGAAGATCGCCTGTTCTATTGCCAGCAGCGCGGCATCGATCCGCAGGAAGCGACGGCGCTCATCGTCGGCG
GCTTCTGCCAGGCGGTGCTCGAAGCGCTGCCGATGGAGTTCGCGCTCGAGGCGAAGGCATTGCTCGCGGTGTCGCTCGAG
GGCGCCGTCGGCTGA

Upstream 100 bases:

>100_bases
CCATATACAACAATTAAGGCCAACGACCGAACCGAGTCGCGCCGCGCGTCGCACGTCGAACCGCGCGGAGGCTACCGCCC
TGCTCTACATGGATTCGCCC

Downstream 100 bases:

>100_bases
CCCCACACATGACAAACGAAGGAATCGCCATGAATCGATCCGAACCCCTGCTGCAGGTATTCGACCTGAGCGTCGAAGTC
GCGAAGCGCCGCGTGCTGCA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MLNVDQPTPLARALEQTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKLRIAPI
DFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHA
VEHHPELIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLE
GCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIETGSAITWKYPS
VVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIG
PQCGAHTFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLE
GAVG

Sequences:

>Translated_484_residues
MLNVDQPTPLARALEQTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKLRIAPI
DFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHA
VEHHPELIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLE
GCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIETGSAITWKYPS
VVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIG
PQCGAHTFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLE
GAVG
>Mature_484_residues
MLNVDQPTPLARALEQTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKLRIAPI
DFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHA
VEHHPELIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLE
GCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIETGSAITWKYPS
VVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIG
PQCGAHTFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLE
GAVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=480, Percent_Identity=57.5, Blast_Score=590, Evalue=1e-170,
Organism=Escherichia coli, GI1787971, Length=156, Percent_Identity=29.4871794871795, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53157; Mature: 53157

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVDQPTPLARALEQTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAA
CCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
FERWLAMSPPDWGKLRIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLH
HHHHHCCCCCCCCCEEEEEECCCHHHHHCCCHHHHCCCCCHHHCCHHHHHHHHHHCCCHH
ERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPELIERYLGTVVPPAD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEHHHHHHCCHHHHHHHHCCCCCCCC
NFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLE
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEC
GCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGAR
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
SRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSR
CCEEEEEECCCCEEEEECCEEEEECCCCCCCEEEEEHHCCCCCCCCCCEEEEECCCHHHH
IVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVV
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCEEE
EHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLE
ECCCHHEEECCCHHHHHHHCCCCHHHHHEEEEHHHHHHHHHHCCHHHHHHHHEEEEEEEC
GAVG
CCCC
>Mature Secondary Structure
MLNVDQPTPLARALEQTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAA
CCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
FERWLAMSPPDWGKLRIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLH
HHHHHCCCCCCCCCEEEEEECCCHHHHHCCCHHHHCCCCCHHHCCHHHHHHHHHHCCCHH
ERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPELIERYLGTVVPPAD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEHHHHHHCCHHHHHHHHCCCCCCCC
NFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLE
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEC
GCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGAR
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
SRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSR
CCEEEEEECCCCEEEEECCEEEEECCCCCCCEEEEEHHCCCCCCCCCCEEEEECCCHHHH
IVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVV
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCEEE
EHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLE
ECCCHHEEECCCHHHHHHHCCCCHHHHHEEEEHHHHHHHHHHCCHHHHHHHHEEEEEEEC
GAVG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]