Click here to switch to the map view.

The map label for this gene is dgoA [H]

Identifier: 126452781

GI number: 126452781

Start: 3393433

End: 3394122

Strand: Reverse

Name: dgoA [H]

Synonym: BURPS1106A_3488

Alternate gene names: 126452781

Gene position: 3394122-3393433 (Counterclockwise)

Preceding gene: 126452239

Following gene: 126454797

Centisome position: 85.1

GC content: 73.19

Gene sequence:

>690_bases
ATGTCGATGGATGCCGAAGCACTGCGTTTTCCCGCGCCGTATGCGCCGCATCGCGCGCTGATGCGCGCGTTCGGCGCGTG
CCCGATGATCGCGATCCTGCGCGGCGTCACCCCCGCCGACGCGGCGGCGCACGGCGCCGCGCTGTATGAAGCGGGTTTTC
GCATCGTCGAGGTGCCGCTCAATTCGCCCGATCCGTTCGACAGTATCGCCGCGCTGCGCACGGCGCTGCCGGCCGATGCG
ATCGTCGGCGCGGGCACCGTGCTGCGCGCCGGGCATGTCGACGAAGTCGTGCGCGCGGGCGGCGAACTGATCGTGATGCC
GCATGCGGACGGCGACGTCGTGCGCCGCGCGAAGACGCTCGGCATCGGATGCGCGCCCGGCGTCGCGACGCCGACCGAAG
CGTTCGCCGCGCTCGCGAACGGCGCGGACGTGCTGAAGATGTTTCCCGCCGAGCAGCTCGGCACGCCGGCCGTGAAGGCG
TGGCGCGCGGTGATCGACGCGCGCGTGCCGCTCGTGCCGGTCGGCGGGATCACGCCGGAGAACATGGGGCCGTATCTCGC
GGCGGGCGCGAGCGGCTTCGGCCTCGGCTCGGCGCTGTACGCGCCCGGACAGACGAGCGCCGTCACCGCCGTGCGCGCGC
ACGCGTTCGTCAACGGATGGCGGATCGCCCGCCACGGAGCGGCACGGTGA

Upstream 100 bases:

>100_bases
CGCATCGCGGTGCAGGCGGGGCTCGTCGGCGCAGCGTGCGACGCGCCGCTCGCGCCGCAATAGGCCCGCGTCTCGACACG
AAGTGGCTGGAGGAGAGGAC

Downstream 100 bases:

>100_bases
ACCGGCTCGCGGGCAAGGTCGCGATCGTGACGGGCGCGGGGCGCGGCATCGGCGCGGCGATCGCGCGCGCGTTCGTGCGC
GAAGGCGCGGCCGTCGCGAT

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSMDAEALRFPAPYAPHRALMRAFGACPMIAILRGVTPADAAAHGAALYEAGFRIVEVPLNSPDPFDSIAALRTALPADA
IVGAGTVLRAGHVDEVVRAGGELIVMPHADGDVVRRAKTLGIGCAPGVATPTEAFAALANGADVLKMFPAEQLGTPAVKA
WRAVIDARVPLVPVGGITPENMGPYLAAGASGFGLGSALYAPGQTSAVTAVRAHAFVNGWRIARHGAAR

Sequences:

>Translated_229_residues
MSMDAEALRFPAPYAPHRALMRAFGACPMIAILRGVTPADAAAHGAALYEAGFRIVEVPLNSPDPFDSIAALRTALPADA
IVGAGTVLRAGHVDEVVRAGGELIVMPHADGDVVRRAKTLGIGCAPGVATPTEAFAALANGADVLKMFPAEQLGTPAVKA
WRAVIDARVPLVPVGGITPENMGPYLAAGASGFGLGSALYAPGQTSAVTAVRAHAFVNGWRIARHGAAR
>Mature_228_residues
SMDAEALRFPAPYAPHRALMRAFGACPMIAILRGVTPADAAAHGAALYEAGFRIVEVPLNSPDPFDSIAALRTALPADAI
VGAGTVLRAGHVDEVVRAGGELIVMPHADGDVVRRAKTLGIGCAPGVATPTEAFAALANGADVLKMFPAEQLGTPAVKAW
RAVIDARVPLVPVGGITPENMGPYLAAGASGFGLGSALYAPGQTSAVTAVRAHAFVNGWRIARHGAAR

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=194, Percent_Identity=47.9381443298969, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1788156, Length=143, Percent_Identity=36.3636363636364, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 23373; Mature: 23242

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMDAEALRFPAPYAPHRALMRAFGACPMIAILRGVTPADAAAHGAALYEAGFRIVEVPL
CCCCCCHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEC
NSPDPFDSIAALRTALPADAIVGAGTVLRAGHVDEVVRAGGELIVMPHADGDVVRRAKTL
CCCCCHHHHHHHHHHCCHHHHHCCCHHEECCCHHHHHHCCCCEEEEECCCCHHHHHHHHH
GIGCAPGVATPTEAFAALANGADVLKMFPAEQLGTPAVKAWRAVIDARVPLVPVGGITPE
CCCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHHHCCCCEEEECCCCCC
NMGPYLAAGASGFGLGSALYAPGQTSAVTAVRAHAFVNGWRIARHGAAR
CCCCEEECCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCHHHCCCCCCC
>Mature Secondary Structure 
SMDAEALRFPAPYAPHRALMRAFGACPMIAILRGVTPADAAAHGAALYEAGFRIVEVPL
CCCCCHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEC
NSPDPFDSIAALRTALPADAIVGAGTVLRAGHVDEVVRAGGELIVMPHADGDVVRRAKTL
CCCCCHHHHHHHHHHCCHHHHHCCCHHEECCCHHHHHHCCCCEEEEECCCCHHHHHHHHH
GIGCAPGVATPTEAFAALANGADVLKMFPAEQLGTPAVKAWRAVIDARVPLVPVGGITPE
CCCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHHHCCCCEEEECCCCCC
NMGPYLAAGASGFGLGSALYAPGQTSAVTAVRAHAFVNGWRIARHGAAR
CCCCEEECCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]