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The map label for this gene is 126452744

Identifier: 126452744

GI number: 126452744

Start: 2865747

End: 2866904

Strand: Reverse

Name: 126452744

Synonym: BURPS1106A_2923

Alternate gene names: NA

Gene position: 2866904-2865747 (Counterclockwise)

Preceding gene: 126455199

Following gene: 126453389

Centisome position: 71.88

GC content: 68.74

Gene sequence:

>1158_bases
ATGAGCGAACGATACGACGTCGAATACCCGGTGATGCCGCCCGCGCCCCGCAAGGGGCGCGGCGCGGTGGGCAACCTGCA
GGGGCGCTACGAGACCGTCGAGCGCGAGGCGGTCGACGACGGCTGGACGCGCGACGACGACGGCGAGCCGCGCGCGCCGC
TGCGCACGCAGGTGTTCGAGGAGCGCGCCAGGACGATCCTCACGCGCAATGCGTCGCCCGACATTCCGTTCAATGTATCG
CTGAATCCGTATCGCGGCTGCGAGCACGGCTGCATCTACTGCTTCGCGCGGCCGACGCACAGCTATCTCGGGCTGTCGCC
GGGGCTCGATTTCGAGAGCCGAATCTACGCGAAGGTGAATGCCGCGGAGTTGCTCGCGCGCGAACTCGCGAAGCCGCGCT
ACGTGCCCGAGCCGATCGCGCTCGGCGTGAATACGGACGCGTATCAGCCGGTCGAGCGCGAACGGCGGATCACGCGGCAG
GTGATCCAGGTGATGCATGACCATGGTCAGCCGTTTGCCGCGATCACGAAGTCGTCGCTGATCGAGCGTGATCTCGATCT
GCTCGCGCCGATGGCCGAGCGCCGGCAGGTGATGGCGGCCGTCACGATCACGACGCTCGATCCCGAGCTCGCGCGCGCGC
TCGAGCCGCGCGCCGCGACGCCCTCGCGCCGGCTGCGGACGATCCGCGCGCTGCGCGACGCGGGGGTGCCGGTCGGCGTG
AGCATCGCGCCGATGATCCCGTTCGTCACCGAACCGGATCTCGAGCGCGTGCTCGAGGCGTGCGCGGACGCGGGGGCGAC
GCACGCGAGCTATATCGTGTTGCGATTGCCGTGGGAGGTCGCGCCGCTTTTCACCGAATGGCTCGCCGCGCATTTTCCGG
ATCGCGCGGAGCGCGTGATGGCGCGTGTGAGGGACATGCGCGGCGGCAAGGATTACGACGCGGATTTCAGCCGCCGGATG
AAAGGCGAAGGAATGTGGGCCGAGCTGCTCAAGCAGCGCTTCCGGATGGCGGTCAAGCGCTGCGGGCTGAACGAACGCGC
GCGGGGAATTCTCGATTTTTCGCAGTTTTGCGCGCCGCGACGGTCGAAACCGCCGCCGCCCGTGCGACCGCGTGCGGCGG
CGCAAACCGGAGACCAGCCGCAGCTCAGTCTGTTCTGA

Upstream 100 bases:

>100_bases
GCGGGGCCGAAGCGCTTGGCACGAACCGCCAATTGCTGTATGTTTATACAGTAATTGGCGGTTTTGTCATTGGCGGCGCC
GGCCGCGTACCAGAGGCACG

Downstream 100 bases:

>100_bases
GCGGCGCGGGCGATGCGCCGCGCCGGCGGATACGTCATTGAGAAATCTGCTTGGCGGCCTCGACCTGCGATTCGAAGTAC
GTCTGGAACGCGAGCGCGAG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSERYDVEYPVMPPAPRKGRGAVGNLQGRYETVEREAVDDGWTRDDDGEPRAPLRTQVFEERARTILTRNASPDIPFNVS
LNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQ
VIQVMHDHGQPFAAITKSSLIERDLDLLAPMAERRQVMAAVTITTLDPELARALEPRAATPSRRLRTIRALRDAGVPVGV
SIAPMIPFVTEPDLERVLEACADAGATHASYIVLRLPWEVAPLFTEWLAAHFPDRAERVMARVRDMRGGKDYDADFSRRM
KGEGMWAELLKQRFRMAVKRCGLNERARGILDFSQFCAPRRSKPPPPVRPRAAAQTGDQPQLSLF

Sequences:

>Translated_385_residues
MSERYDVEYPVMPPAPRKGRGAVGNLQGRYETVEREAVDDGWTRDDDGEPRAPLRTQVFEERARTILTRNASPDIPFNVS
LNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQ
VIQVMHDHGQPFAAITKSSLIERDLDLLAPMAERRQVMAAVTITTLDPELARALEPRAATPSRRLRTIRALRDAGVPVGV
SIAPMIPFVTEPDLERVLEACADAGATHASYIVLRLPWEVAPLFTEWLAAHFPDRAERVMARVRDMRGGKDYDADFSRRM
KGEGMWAELLKQRFRMAVKRCGLNERARGILDFSQFCAPRRSKPPPPVRPRAAAQTGDQPQLSLF
>Mature_384_residues
SERYDVEYPVMPPAPRKGRGAVGNLQGRYETVEREAVDDGWTRDDDGEPRAPLRTQVFEERARTILTRNASPDIPFNVSL
NPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQV
IQVMHDHGQPFAAITKSSLIERDLDLLAPMAERRQVMAAVTITTLDPELARALEPRAATPSRRLRTIRALRDAGVPVGVS
IAPMIPFVTEPDLERVLEACADAGATHASYIVLRLPWEVAPLFTEWLAAHFPDRAERVMARVRDMRGGKDYDADFSRRMK
GEGMWAELLKQRFRMAVKRCGLNERARGILDFSQFCAPRRSKPPPPVRPRAAAQTGDQPQLSLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43383; Mature: 43252

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERYDVEYPVMPPAPRKGRGAVGNLQGRYETVEREAVDDGWTRDDDGEPRAPLRTQVFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ERARTILTRNASPDIPFNVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVN
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHH
AAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQVIQVMHDHGQPFAAITKSSL
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IERDLDLLAPMAERRQVMAAVTITTLDPELARALEPRAATPSRRLRTIRALRDAGVPVGV
HHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
SIAPMIPFVTEPDLERVLEACADAGATHASYIVLRLPWEVAPLFTEWLAAHFPDRAERVM
CHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHH
ARVRDMRGGKDYDADFSRRMKGEGMWAELLKQRFRMAVKRCGLNERARGILDFSQFCAPR
HHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
RSKPPPPVRPRAAAQTGDQPQLSLF
CCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
SERYDVEYPVMPPAPRKGRGAVGNLQGRYETVEREAVDDGWTRDDDGEPRAPLRTQVFE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ERARTILTRNASPDIPFNVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVN
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHH
AAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQVIQVMHDHGQPFAAITKSSL
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IERDLDLLAPMAERRQVMAAVTITTLDPELARALEPRAATPSRRLRTIRALRDAGVPVGV
HHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
SIAPMIPFVTEPDLERVLEACADAGATHASYIVLRLPWEVAPLFTEWLAAHFPDRAERVM
CHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHH
ARVRDMRGGKDYDADFSRRMKGEGMWAELLKQRFRMAVKRCGLNERARGILDFSQFCAPR
HHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
RSKPPPPVRPRAAAQTGDQPQLSLF
CCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]