| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is purA [H]
Identifier: 126452740
GI number: 126452740
Start: 2205068
End: 2206414
Strand: Reverse
Name: purA [H]
Synonym: BURPS1106A_2216
Alternate gene names: 126452740
Gene position: 2206414-2205068 (Counterclockwise)
Preceding gene: 126453631
Following gene: 126454348
Centisome position: 55.32
GC content: 67.04
Gene sequence:
>1347_bases ATGTCTGCCAGCGCAGTGAACGTGACTCCCGGGCGCAACGTCGTCGTCGTGGGGACTCAATGGGGTGATGAAGGCAAAGG CAAGATCGTCGACTGGCTGACGGACCACGCTCAGGGCGTCGTGCGTTTCCAGGGCGGCCACAACGCCGGCCACACCCTCA TCATCGGCGGCAAGAAGACCATCTTGCGCCTCATCCCGTCGGGCATCATGCGTGAAGGCGTCGCCTGCTACATCGGCAAC GGCGTCGTCCTCTCCCCCGAGGCACTGTTCAAGGAAATCGGCGAGCTGGAAGAAGCCGGCCTGTCCGTTCGCGAGCGCCT GTTCATTTCCGAGGCGACGACGCTGATTCTCCCGTATCACGTCGCGATCGACCAGGCGCGCGAGGCGCGCAGGGGCGCGG GCAAGATCGGCACGACGGGCCGCGGCATCGGCCCCGCATACGAGGACAAGGTCGGCCGCCGCGCGCTGCGCGTGCAGGAT CTGTTCGACGCGAGAACGTTCGCCGACCGCCTGCGCGAGAATCTCGACTTCCACAATTTCGTGCTGACGCAGTATCTCGG CGGCGCGGCCGTCGATTTCCAGGCGACGCTCGACACGATGCTCGGCTACGCGGATCGCCTGAAGCCGATGGTCACGGACG TGTCGCGCCGCCTGTACGAAGAAAACCACGCGGGCCGCAACCTGCTGTTCGAAGGCGCGCAGGGCACGCTGCTCGACATC GACCACGGTACCTATCCGTTCGTCACGTCGAGCAACTGCGTCGCGGGCGCGGCGGCGGCGGGCGCGGGCGTCGGCCCGCA GAAGCTCGACTACATCCTCGGCATCACGAAGGCGTATTGCACGCGCGTCGGCTCGGGCCCGTTCCCGAGCGAGCTGTACG ACGCGGACAATCCGAGCCGCCAGGATCAGATCGGCATCACGCTCGCGAACGTCGGCAAGGAATTCGGCTCCGTCACGGGC CGCCCGCGCCGCACCGGCTGGCTCGACGCGGCCGCGCTGCGCCGCTCGATCCAGATCAACGGCGTGTCGGGCCTGTGCAT GACGAAGCTCGACGTGCTCGACGGCCTCGACGAAGTGAAGCTGTGCGTCGGCTACAAGATCGACGGTGAAGACGTCGATC TGCTGCCGCGCGGCGCGGCCGAAGTCGCGCGTTGCGAACCCGTCTACGAGACGTTCGGCGGCTGGAAGGAAAGCACGGTC GGCATCGACTCGTGGGACGCGCTGCCCGCGAACGCGCGTGCGTACCTGACGCGCGTGCAGGAAGTGGCCGGCGTGCCGAT CGACATGGTGTCCACGGGCCCGGATCGCGACGAGACGATCCTGCTGCGTCATCCGTTCAAGGTGTAA
Upstream 100 bases:
>100_bases ATGCGCGTTCGGCGTGCAATGTCGTTGAAGCGAAACGGAAAAATTCGGAACCGGCGGCGAACCTAGGTAGAATACGTTTT TAACCAGCTAACGAATCAAC
Downstream 100 bases:
>100_bases TTGCAGATGACGCAGAACCTCACAGCCTCGATCACGATGTCCGATCCGCGCAACGACGACAAGAATCTCTGGGTCGGCTG GGACGAATACCACCGGCTGA
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase 1; AdSS 1; IMP--aspartate ligase 1 [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMREGVACYIGN GVVLSPEALFKEIGELEEAGLSVRERLFISEATTLILPYHVAIDQAREARRGAGKIGTTGRGIGPAYEDKVGRRALRVQD LFDARTFADRLRENLDFHNFVLTQYLGGAAVDFQATLDTMLGYADRLKPMVTDVSRRLYEENHAGRNLLFEGAQGTLLDI DHGTYPFVTSSNCVAGAAAAGAGVGPQKLDYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLANVGKEFGSVTG RPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKIDGEDVDLLPRGAAEVARCEPVYETFGGWKESTV GIDSWDALPANARAYLTRVQEVAGVPIDMVSTGPDRDETILLRHPFKV
Sequences:
>Translated_448_residues MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMREGVACYIGN GVVLSPEALFKEIGELEEAGLSVRERLFISEATTLILPYHVAIDQAREARRGAGKIGTTGRGIGPAYEDKVGRRALRVQD LFDARTFADRLRENLDFHNFVLTQYLGGAAVDFQATLDTMLGYADRLKPMVTDVSRRLYEENHAGRNLLFEGAQGTLLDI DHGTYPFVTSSNCVAGAAAAGAGVGPQKLDYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLANVGKEFGSVTG RPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKIDGEDVDLLPRGAAEVARCEPVYETFGGWKESTV GIDSWDALPANARAYLTRVQEVAGVPIDMVSTGPDRDETILLRHPFKV >Mature_447_residues SASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMREGVACYIGNG VVLSPEALFKEIGELEEAGLSVRERLFISEATTLILPYHVAIDQAREARRGAGKIGTTGRGIGPAYEDKVGRRALRVQDL FDARTFADRLRENLDFHNFVLTQYLGGAAVDFQATLDTMLGYADRLKPMVTDVSRRLYEENHAGRNLLFEGAQGTLLDID HGTYPFVTSSNCVAGAAAAGAGVGPQKLDYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLANVGKEFGSVTGR PRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKIDGEDVDLLPRGAAEVARCEPVYETFGGWKESTVG IDSWDALPANARAYLTRVQEVAGVPIDMVSTGPDRDETILLRHPFKV
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=440, Percent_Identity=42.0454545454545, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI34577063, Length=443, Percent_Identity=39.5033860045147, Blast_Score=306, Evalue=2e-83, Organism=Homo sapiens, GI40316944, Length=405, Percent_Identity=40.7407407407407, Blast_Score=289, Evalue=4e-78, Organism=Escherichia coli, GI1790620, Length=437, Percent_Identity=60.8695652173913, Blast_Score=539, Evalue=1e-154, Organism=Caenorhabditis elegans, GI25146555, Length=436, Percent_Identity=40.1376146788991, Blast_Score=310, Evalue=1e-84, Organism=Caenorhabditis elegans, GI25146553, Length=436, Percent_Identity=40.1376146788991, Blast_Score=310, Evalue=1e-84, Organism=Saccharomyces cerevisiae, GI6324109, Length=437, Percent_Identity=40.045766590389, Blast_Score=315, Evalue=8e-87, Organism=Drosophila melanogaster, GI21356033, Length=456, Percent_Identity=39.0350877192982, Blast_Score=312, Evalue=3e-85,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 48331; Mature: 48200
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKT CCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHH ILRLIPSGIMREGVACYIGNGVVLSPEALFKEIGELEEAGLSVRERLFISEATTLILPYH HHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEHH VAIDQAREARRGAGKIGTTGRGIGPAYEDKVGRRALRVQDLFDARTFADRLRENLDFHNF HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VLTQYLGGAAVDFQATLDTMLGYADRLKPMVTDVSRRLYEENHAGRNLLFEGAQGTLLDI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEC DHGTYPFVTSSNCVAGAAAAGAGVGPQKLDYILGITKAYCTRVGSGPFPSELYDADNPSR CCCCCCEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC QDQIGITLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVK CHHHCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE LCVGYKIDGEDVDLLPRGAAEVARCEPVYETFGGWKESTVGIDSWDALPANARAYLTRVQ EEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EVAGVPIDMVSTGPDRDETILLRHPFKV HHHCCCEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure SASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKT CCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHH ILRLIPSGIMREGVACYIGNGVVLSPEALFKEIGELEEAGLSVRERLFISEATTLILPYH HHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEHH VAIDQAREARRGAGKIGTTGRGIGPAYEDKVGRRALRVQDLFDARTFADRLRENLDFHNF HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VLTQYLGGAAVDFQATLDTMLGYADRLKPMVTDVSRRLYEENHAGRNLLFEGAQGTLLDI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEC DHGTYPFVTSSNCVAGAAAAGAGVGPQKLDYILGITKAYCTRVGSGPFPSELYDADNPSR CCCCCCEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC QDQIGITLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVK CHHHCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE LCVGYKIDGEDVDLLPRGAAEVARCEPVYETFGGWKESTVGIDSWDALPANARAYLTRVQ EEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EVAGVPIDMVSTGPDRDETILLRHPFKV HHHCCCEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA