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The map label for this gene is recO [H]

Identifier: 126452734

GI number: 126452734

Start: 2792333

End: 2793160

Strand: Reverse

Name: recO [H]

Synonym: BURPS1106A_2838

Alternate gene names: 126452734

Gene position: 2793160-2792333 (Counterclockwise)

Preceding gene: 126451757

Following gene: 126455453

Centisome position: 70.03

GC content: 69.81

Gene sequence:

>828_bases
ATGACCGACGAGGCCGACGCCGACCCGCAACCCTTCGCCGCGCCGCCCGCAACCGGCGCGCCGGCTGCCGACAAGCCGGC
GCGCAAGCCGCGCCGCGCCGCGCCGCGCACGTCCGAATTCCGGATCGCCGAGCAGCCGGCGTTCGTGCTGCACAGCTATC
CGTACCGGGAGACGAGCCTCGTCATCGACGTGCTCACGCGCGACCACGGCCGCATCGCGCTCGTCGCGAAGGGCGCGAAG
CGCCCGCATTCGGCGCTGCGCGGCGTGCTGCAGACGTTCCAGCCGCTGTCGCTGTCGTGGTCGGGCAAATCGGAGCTGCG
CACGCTGACGGGCGCCGAATGGGTGGGCGGCATGCTGCCGCTCGCGGGCGACGCGCTGTTGTGCGGCTTCTACGCGAACG
AGCTGCTCGTCAAGTTCTGTGCGCGCGAAGATCCGCATCCGCCGCTCTTTCAGCACTACCTCGTCACGCTCACGCGCCTG
GCGCACGGCGAGCCGCCCGTGCAGGTGCTGCGCTCGTTCGAGCGCGTGCTGCTGCGCGAGACGGGCTATGCGATGACGCT
CAAGCGCACCGTCGCGCGGCGCGCGGTCGAGCCCGACAAGCTCTATGTGTTCGATCCGCAGCGCGGCGTGCGCGACGCGG
GCAGCGACGCGCCGTCGCACTGGCCCGTGATCGCCGGCCAGACGTTGCTCGACATGGAAGAGGACGATTACCATCGGGCG
CAGACCGTTGCGCAAAGCAAGACGCTGATGCGCTTTCTGCTCAACACCTATCTGGGCGGCACGCCGCTCGCCACGCGTCA
GATCCTGATCGACCTGCAAAACCTATGA

Upstream 100 bases:

>100_bases
GTCTATCTCGAGACTTTCGTCAAGGTGAGGAGCGGCTGGGCGGACAACGAAGCGGGGCTGCGCGCCTATGGGTACGAATG
ACGGGACGTCCGATGTCGGG

Downstream 100 bases:

>100_bases
GCTTCTTCCTGACAACGCCCGCCGCCATCGACCTGGGCGTGAACATCGACCACGTCGCGACGCTGCGCAATGCGCGCGGC
ACCGCGTATCCGGACCCCGT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTDEADADPQPFAAPPATGAPAADKPARKPRRAAPRTSEFRIAEQPAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAK
RPHSALRGVLQTFQPLSLSWSGKSELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRL
AHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWPVIAGQTLLDMEEDDYHRA
QTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL

Sequences:

>Translated_275_residues
MTDEADADPQPFAAPPATGAPAADKPARKPRRAAPRTSEFRIAEQPAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAK
RPHSALRGVLQTFQPLSLSWSGKSELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRL
AHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWPVIAGQTLLDMEEDDYHRA
QTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
>Mature_274_residues
TDEADADPQPFAAPPATGAPAADKPARKPRRAAPRTSEFRIAEQPAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKR
PHSALRGVLQTFQPLSLSWSGKSELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLA
HGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWPVIAGQTLLDMEEDDYHRAQ
TVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=228, Percent_Identity=36.8421052631579, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 30513; Mature: 30382

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEADADPQPFAAPPATGAPAADKPARKPRRAAPRTSEFRIAEQPAFVLHSYPYRETSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCEEEEECCCCCHHHH
VIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSELRTLTGAEWVGGMLP
EEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHCCCCC
LAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAHGEPPVQVLRSFERVLLRE
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWPVIAGQTLLDMEEDDYHRA
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCEECCCCCHHHHH
QTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCC
>Mature Secondary Structure 
TDEADADPQPFAAPPATGAPAADKPARKPRRAAPRTSEFRIAEQPAFVLHSYPYRETSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCEEEEECCCCCHHHH
VIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSELRTLTGAEWVGGMLP
EEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHCCCCC
LAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAHGEPPVQVLRSFERVLLRE
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWPVIAGQTLLDMEEDDYHRA
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCEECCCCCHHHHH
QTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA