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The map label for this gene is recA

Identifier: 126452699

GI number: 126452699

Start: 798968

End: 800038

Strand: Direct

Name: recA

Synonym: BURPS1106A_0814

Alternate gene names: 126452699

Gene position: 798968-800038 (Clockwise)

Preceding gene: 126452293

Following gene: 126454103

Centisome position: 20.03

GC content: 64.24

Gene sequence:

>1071_bases
ATGGAAGAAAGCAAGAAAGGCTCCGGGCTGACTGCCGAAAAGAGCAAGGCGCTCGCCGCCGCGCTCGCGCAGATCGAGAA
GCAGTTCGGCAAAGGGTCGATCATGCGGCTCGGCGACGGCGAGGCGGTCGAGGATATCCAGGTGGTGTCCACGGGCTCGC
TCGGTCTCGATATCGCGCTCGGCGTCGGTGGCTTGCCGCGCGGCCGTGTGGTCGAAATCTACGGGCCGGAATCGTCCGGC
AAGACGACGCTCACGCTGCAGGTGATCGCCGAGATGCAGAAGCTCGGCGGCACGGCGGCGTTCATCGACGCGGAGCACGC
GCTCGACGTCCAGTATGCGTCGAAGCTCGGCGTGAACGTGCCGGAGCTGCTGATCTCGCAGCCGGACACGGGTGAGCAGG
CGCTCGAAATCGTCGACGCGCTGGTCCGCTCGGGCTCGATCGACATGATCGTCATCGACTCGGTCGCGGCGCTCGTGCCG
AAGGCCGAAATCGAAGGCGAGATGGGCGACGCGCTGCCCGGCCTGCAGGCCCGCCTGATGTCGCAGGCGCTGCGCAAGCT
GACGGGCACGATCAAGCGCACGAACTGCCTCGTGATCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTCGGCA
ACCCGGAAACCACGACGGGCGGCAACGCGCTGAAGTTCTACTCGTCGGTGCGTCTCGACATTCGCCGGATCGGCTCGATC
AAGAAGAACGACGAGGTGATCGGCAACGAAACGCGCGTGAAGGTCGTCAAGAACAAGGTGTCGCCGCCGTTCCGCGAAGC
GATCTTCGACATCCTGTACGGCGAAGGCATTTCGCGCCAGGGCGAGATCATCGATCTCGGCGTGCAGGCGAAGATCGTCG
ACAAGGCGGGCGCGTGGTACAGCTATAGCGGCGAGAAGATCGGCCAGGGCAAGGACAACGCGCGCGAATTCCTGCGCGAG
AATCCGGAAATCGCGCGCGAGATCGAGAATCGCATTCGCGAGTCGCTCGGAGTCGCCGCGATGCCGCAGGGCGCCGGTTC
CGAGGCCGAGATCATGGACGAAGAGGAGTAA

Upstream 100 bases:

>100_bases
TTTTATACAGTGTCTGCATTCGCGCACCTAACGGCTTGCTGGCCGTGTCGTAGCCGGTGCGTCCGTATCAGACGCTGCTC
ATCATAGCAAAGGACGATTC

Downstream 100 bases:

>100_bases
TGCGCAAGAACCGGGAGGGCGCGGATTCGCAACAGGCAGGGCACGGTGCGCGGACGGCGTCCGCCGGCGAGCCCCACGCC
GAACGCGAAACGCGCGCGAC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MEESKKGSGLTAEKSKALAAALAQIEKQFGKGSIMRLGDGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYASKLGVNVPELLISQPDTGEQALEIVDALVRSGSIDMIVIDSVAALVP
KAEIEGEMGDALPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSI
KKNDEVIGNETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYSGEKIGQGKDNAREFLRE
NPEIAREIENRIRESLGVAAMPQGAGSEAEIMDEEE

Sequences:

>Translated_356_residues
MEESKKGSGLTAEKSKALAAALAQIEKQFGKGSIMRLGDGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYASKLGVNVPELLISQPDTGEQALEIVDALVRSGSIDMIVIDSVAALVP
KAEIEGEMGDALPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSI
KKNDEVIGNETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYSGEKIGQGKDNAREFLRE
NPEIAREIENRIRESLGVAAMPQGAGSEAEIMDEEE
>Mature_356_residues
MEESKKGSGLTAEKSKALAAALAQIEKQFGKGSIMRLGDGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYASKLGVNVPELLISQPDTGEQALEIVDALVRSGSIDMIVIDSVAALVP
KAEIEGEMGDALPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSI
KKNDEVIGNETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYSGEKIGQGKDNAREFLRE
NPEIAREIENRIRESLGVAAMPQGAGSEAEIMDEEE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=323, Percent_Identity=72.1362229102167, Blast_Score=481, Evalue=1e-137,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_BURMA (Q62MH0)

Other databases:

- EMBL:   CP000010
- RefSeq:   YP_102098.1
- ProteinModelPortal:   Q62MH0
- GeneID:   3089597
- GenomeReviews:   CP000010_GR
- KEGG:   bma:BMA0272
- TIGR:   BMA0272
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   Q62MH0
- ProtClustDB:   PRK09354
- BioCyc:   BMAL243160:BMA_0272-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38173; Mature: 38173

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESKKGSGLTAEKSKALAAALAQIEKQFGKGSIMRLGDGEAVEDIQVVSTGSLGLDIAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEE
GVGGLPRGRVVEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYASKLGVNV
CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC
PELLISQPDTGEQALEIVDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDALPGLQARLM
HHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHCCCCCCCCCCHHHHHHH
SQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSI
HHHHHHHHHHHHHCCEEEEEEEHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
KKNDEVIGNETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWY
CCCCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCEE
SYSGEKIGQGKDNAREFLRENPEIAREIENRIRESLGVAAMPQGAGSEAEIMDEEE
EECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEESKKGSGLTAEKSKALAAALAQIEKQFGKGSIMRLGDGEAVEDIQVVSTGSLGLDIAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEE
GVGGLPRGRVVEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYASKLGVNV
CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC
PELLISQPDTGEQALEIVDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDALPGLQARLM
HHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHCCCCCCCCCCHHHHHHH
SQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSI
HHHHHHHHHHHHHCCEEEEEEEHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
KKNDEVIGNETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWY
CCCCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCEE
SYSGEKIGQGKDNAREFLRENPEIAREIENRIRESLGVAAMPQGAGSEAEIMDEEE
EECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA