| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452681
Identifier: 126452681
GI number: 126452681
Start: 3512269
End: 3512892
Strand: Reverse
Name: 126452681
Synonym: BURPS1106A_3607
Alternate gene names: NA
Gene position: 3512892-3512269 (Counterclockwise)
Preceding gene: 126451568
Following gene: 126451495
Centisome position: 88.08
GC content: 67.79
Gene sequence:
>624_bases ATGACCGTCAAGGCAGTCGTATTCGATTTCGGCGGCGTGCTGATCGACTGGAGCCCCGAGTATCTGTACCGGAAACTGAT TCCCGATGAAGCCGAGCGGCGCTGGTTTCTCACGCACGTATGCGGAATGGACTGGGTGGTGAGGCAGGACGGCGGCCAGA CGATCGAGGAGGGGACCGCCGAGCGTATCGCGCTGTTTCCCGAGCATGAGGCGCTGATCCGCGCGTTCTACGCGCGGTGG CACGAGATGATCGGCGGCGAGCTCGCGGACGGCGCCGCGCTCGTCGACGCGCTCGATGCGCGCGGCGTGCCGCTCTTCGG GCTCACGAACTGGTCCGCGCAGACGTTTCCGTATGCGTGGGAGAACTTCCCCGTGCTGCGGCGTTTCAGGGACATCGTCG TGTCCGGCCGCGTGAAGCTCGCGAAGCCCGATCCGGCGATCTACCGCGAGATGCACGCGCGGATCGAACCGCATCTGCCG GGCATCGCGCCGCACGAGCTCGTTTTCATCGACGACAACGCGAAGAACGCGGCGGCCGCGGCCGCGCTCGGCTGGCACGG GATTCATCACACGAGCGCCGCGGCGACGCGGGCGCGGCTGCGCGAGCTGGGCGCGCTTGGCTGA
Upstream 100 bases:
>100_bases AAATCGTCGCGCATCACAATTTCATCTGGAGCCACTGTTCGTTCTCGGGCAACGGCGTTGCGCCGCGGCCGCTCGACGAG GTGATCGCCGCGGAGCTCGC
Downstream 100 bases:
>100_bases CGGCGCGGGTGATGCGCGGCGATGCGGCGGCGCGGCGCGGCGCGCCGTCGCCGCGAGCCCGTTCGCGGGGACTTGCGCCG GGCGGTAAGGCGCCGGTGGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; Alpha Beta Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTAERIALFPEHEALIRAFYARW HEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAWENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLP GIAPHELVFIDDNAKNAAAAAALGWHGIHHTSAAATRARLRELGALG
Sequences:
>Translated_207_residues MTVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTAERIALFPEHEALIRAFYARW HEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAWENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLP GIAPHELVFIDDNAKNAAAAAALGWHGIHHTSAAATRARLRELGALG >Mature_206_residues TVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTAERIALFPEHEALIRAFYARWH EMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAWENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLPG IAPHELVFIDDNAKNAAAAAALGWHGIHHTSAAATRARLRELGALG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23150; Mature: 23018
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTA CCEEEEEEECCCEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCHHCCCC ERIALFPEHEALIRAFYARWHEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAW HHEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC ENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLPGIAPHELVFIDDNAKNAAAA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH AALGWHGIHHTSAAATRARLRELGALG HHHHHCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTA CEEEEEEECCCEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCHHCCCC ERIALFPEHEALIRAFYARWHEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAW HHEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC ENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLPGIAPHELVFIDDNAKNAAAA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH AALGWHGIHHTSAAATRARLRELGALG HHHHHCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA