| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is bktB [H]
Identifier: 126452677
GI number: 126452677
Start: 2183750
End: 2185033
Strand: Reverse
Name: bktB [H]
Synonym: BURPS1106A_2197
Alternate gene names: 126452677
Gene position: 2185033-2183750 (Counterclockwise)
Preceding gene: 126454092
Following gene: 126452275
Centisome position: 54.78
GC content: 69.63
Gene sequence:
>1284_bases GTGAGCCCGCGCGCGCGGCGCGCGATCCGAATGCATGACGTGCGCGGCCGCGACCGCGCGCTCCATCGGTTTTCATCAAG AGAAGAGAGGGAGGCAACGATGCAACGCGAAGTAGTGGTGGTGAGCGGCGTACGCACGGCGATCGGCGATTTCGGCGGCA GCCTGAAGGACTTCGCGCCGACCGAGCTCGGCGCGCGGGTCGTGCGCGAGGTGCTGTCGCGCGCGCAGGTGTCGGGCGAC GAGGTCGGCCACGTCGTGTTCGGCAATGTCGTGCACACGGAGCCGAAGGACATGTATCTCGCGCGCGTCGCGGCGATCAA CGGCGGTATCGCGCAGCACGCGCCCGCGCTGACGGTCAACCGTCTCTGCGGCTCCGGCCTGCAGGCGATCGTGTCGGCCG CGCAGAACGTGCTGCTCGGCGACGCGGACATCGCGGTCGCGGGCGGCGCGGAGAACATGAGCCGCGCGCCGTACTCGGTG CCGGCCGCGCGCTTCGGCCAGCGCATGGGCGATGCGAAGCTCGTCGACATGATGATCGGCGCGCTCAACGATCCGTTCCA GTCGATTCACATGGGCGTGACGGCCGAGAACGTCGCGGCGAAGTACGGGATCACGCGCGACGCGCAGGACGCGCTCGCGC TCGAATCCCACCGGCGCGCGTCGCATGCGACGAAATCCGGCTATTTCAAGGATCAGATCCTGCCGATCGAGATCGCGTCG CGCAAGGGCACGGTCGTGTTCGACGCCGACGAGCACGTGCGCCACGACGCGTCGCTCGACGACTTCACGAAGCTCAAGCC CGTGTTCGCCAAGGAGAACGGCACGGTGACGGCGGGCAACGCGTCGGGCATCAACGATGCGGCCGCCGCGGTGGTGCTGA TGGAGCGCGGCGTCGCCGACAAGCGCGGCGCGAAGCCGCTCGCGCGCCTCGTCTCGTATGCGCACGCGGGCGTCGATCCG GCATACATGGGCATCGGCCCCGTGCCCGCGACGAAGAAGGCGCTCGAGCGCGCGGGCATCACCGTCGCCGATCTCGACGT GATCGAGGCGAACGAGGCGTTCGCCGCGCAGGCGTGCGCGGTGTCGAACGCGCTCGGTCTCGATCCGGCGAAGGTCAACC CGAACGGCTCGGGCATCTCGCTCGGCCATCCGATCGGCGCGACGGGCGCGCTCATCACCGTGAAGGCGCTGTACGAGCTG CAGCGGATCGGCGGGCGCTACGCGCTCGTCACGATGTGCATCGGCGGCGGGCAGGGCATTGCCGCGGTGTTCGAGCGTCT GTGA
Upstream 100 bases:
>100_bases CCGCACGCTATGCGAACGCGGCGGCCGCGCTATCGACGCAAGGGTTCGGCGCGGTCGCGCCGATCCCGTCGCGCGACGCG GTCGAGCGGCTATTGGGCGC
Downstream 100 bases:
>100_bases CGGGAGGGCCGCGCAGTTGAAGCTGATCACCGCAATCCGCGGCGCGGCGCTCGCCGCCGCGCTGGCGACGGCGGCGGGGC TCGCGTTCGCGCAGTCCTCC
Product: beta-ketothiolase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSPRARRAIRMHDVRGRDRALHRFSSREEREATMQREVVVVSGVRTAIGDFGGSLKDFAPTELGARVVREVLSRAQVSGD EVGHVVFGNVVHTEPKDMYLARVAAINGGIAQHAPALTVNRLCGSGLQAIVSAAQNVLLGDADIAVAGGAENMSRAPYSV PAARFGQRMGDAKLVDMMIGALNDPFQSIHMGVTAENVAAKYGITRDAQDALALESHRRASHATKSGYFKDQILPIEIAS RKGTVVFDADEHVRHDASLDDFTKLKPVFAKENGTVTAGNASGINDAAAAVVLMERGVADKRGAKPLARLVSYAHAGVDP AYMGIGPVPATKKALERAGITVADLDVIEANEAFAAQACAVSNALGLDPAKVNPNGSGISLGHPIGATGALITVKALYEL QRIGGRYALVTMCIGGGQGIAAVFERL
Sequences:
>Translated_427_residues MSPRARRAIRMHDVRGRDRALHRFSSREEREATMQREVVVVSGVRTAIGDFGGSLKDFAPTELGARVVREVLSRAQVSGD EVGHVVFGNVVHTEPKDMYLARVAAINGGIAQHAPALTVNRLCGSGLQAIVSAAQNVLLGDADIAVAGGAENMSRAPYSV PAARFGQRMGDAKLVDMMIGALNDPFQSIHMGVTAENVAAKYGITRDAQDALALESHRRASHATKSGYFKDQILPIEIAS RKGTVVFDADEHVRHDASLDDFTKLKPVFAKENGTVTAGNASGINDAAAAVVLMERGVADKRGAKPLARLVSYAHAGVDP AYMGIGPVPATKKALERAGITVADLDVIEANEAFAAQACAVSNALGLDPAKVNPNGSGISLGHPIGATGALITVKALYEL QRIGGRYALVTMCIGGGQGIAAVFERL >Mature_426_residues SPRARRAIRMHDVRGRDRALHRFSSREEREATMQREVVVVSGVRTAIGDFGGSLKDFAPTELGARVVREVLSRAQVSGDE VGHVVFGNVVHTEPKDMYLARVAAINGGIAQHAPALTVNRLCGSGLQAIVSAAQNVLLGDADIAVAGGAENMSRAPYSVP AARFGQRMGDAKLVDMMIGALNDPFQSIHMGVTAENVAAKYGITRDAQDALALESHRRASHATKSGYFKDQILPIEIASR KGTVVFDADEHVRHDASLDDFTKLKPVFAKENGTVTAGNASGINDAAAAVVLMERGVADKRGAKPLARLVSYAHAGVDPA YMGIGPVPATKKALERAGITVADLDVIEANEAFAAQACAVSNALGLDPAKVNPNGSGISLGHPIGATGALITVKALYELQ RIGGRYALVTMCIGGGQGIAAVFERL
Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI167614485, Length=393, Percent_Identity=45.5470737913486, Blast_Score=356, Evalue=2e-98, Organism=Homo sapiens, GI148539872, Length=391, Percent_Identity=45.5242966751918, Blast_Score=349, Evalue=3e-96, Organism=Homo sapiens, GI4501853, Length=396, Percent_Identity=41.9191919191919, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI4557237, Length=408, Percent_Identity=38.4803921568627, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI4504327, Length=425, Percent_Identity=35.2941176470588, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI194353979, Length=391, Percent_Identity=31.9693094629156, Blast_Score=160, Evalue=3e-39, Organism=Escherichia coli, GI1788554, Length=398, Percent_Identity=50, Blast_Score=347, Evalue=6e-97, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=46.6836734693878, Blast_Score=332, Evalue=2e-92, Organism=Escherichia coli, GI1787663, Length=404, Percent_Identity=43.3168316831683, Blast_Score=309, Evalue=3e-85, Organism=Escherichia coli, GI48994986, Length=398, Percent_Identity=39.1959798994975, Blast_Score=255, Evalue=4e-69, Organism=Escherichia coli, GI1788683, Length=409, Percent_Identity=35.4523227383863, Blast_Score=220, Evalue=1e-58, Organism=Caenorhabditis elegans, GI133906874, Length=391, Percent_Identity=45.5242966751918, Blast_Score=342, Evalue=2e-94, Organism=Caenorhabditis elegans, GI25147385, Length=397, Percent_Identity=34.0050377833753, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17535921, Length=398, Percent_Identity=33.6683417085427, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17551802, Length=423, Percent_Identity=30.9692671394799, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17535917, Length=409, Percent_Identity=27.1393643031785, Blast_Score=146, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6325229, Length=401, Percent_Identity=38.6533665835411, Blast_Score=259, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6322031, Length=442, Percent_Identity=35.2941176470588, Blast_Score=225, Evalue=8e-60, Organism=Drosophila melanogaster, GI24655093, Length=392, Percent_Identity=46.9387755102041, Blast_Score=350, Evalue=1e-96, Organism=Drosophila melanogaster, GI17648125, Length=392, Percent_Identity=42.8571428571429, Blast_Score=311, Evalue=5e-85, Organism=Drosophila melanogaster, GI24640423, Length=411, Percent_Identity=39.9026763990268, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI17137578, Length=443, Percent_Identity=30.9255079006772, Blast_Score=182, Evalue=5e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 44843; Mature: 44712
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS00098 THIOLASE_1 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRARRAIRMHDVRGRDRALHRFSSREEREATMQREVVVVSGVRTAIGDFGGSLKDFAP CCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCEEEEECHHHHHHHCCCCCHHCCH TELGARVVREVLSRAQVSGDEVGHVVFGNVVHTEPKDMYLARVAAINGGIAQHAPALTVN HHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCHHHHHHHHHHHCCCHHHCCCHHHHH RLCGSGLQAIVSAAQNVLLGDADIAVAGGAENMSRAPYSVPAARFGQRMGDAKLVDMMIG HHHCHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH ALNDPFQSIHMGVTAENVAAKYGITRDAQDALALESHRRASHATKSGYFKDQILPIEIAS HCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC RKGTVVFDADEHVRHDASLDDFTKLKPVFAKENGTVTAGNASGINDAAAAVVLMERGVAD CCCCEEECCHHHHHCCCCCHHHHHCCCCEECCCCEEEECCCCCCCHHHHHHHHHHCCCCC KRGAKPLARLVSYAHAGVDPAYMGIGPVPATKKALERAGITVADLDVIEANEAFAAQACA CCCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHCCCEEEECEEEECCHHHHHHHHH VSNALGLDPAKVNPNGSGISLGHPIGATGALITVKALYELQRIGGRYALVTMCIGGGQGI HHHHCCCCCCEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH AAVFERL HHHHHCC >Mature Secondary Structure SPRARRAIRMHDVRGRDRALHRFSSREEREATMQREVVVVSGVRTAIGDFGGSLKDFAP CCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCEEEEECHHHHHHHCCCCCHHCCH TELGARVVREVLSRAQVSGDEVGHVVFGNVVHTEPKDMYLARVAAINGGIAQHAPALTVN HHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCHHHHHHHHHHHCCCHHHCCCHHHHH RLCGSGLQAIVSAAQNVLLGDADIAVAGGAENMSRAPYSVPAARFGQRMGDAKLVDMMIG HHHCHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH ALNDPFQSIHMGVTAENVAAKYGITRDAQDALALESHRRASHATKSGYFKDQILPIEIAS HCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC RKGTVVFDADEHVRHDASLDDFTKLKPVFAKENGTVTAGNASGINDAAAAVVLMERGVAD CCCCEEECCHHHHHCCCCCHHHHHCCCCEECCCCEEEECCCCCCCHHHHHHHHHHCCCCC KRGAKPLARLVSYAHAGVDPAYMGIGPVPATKKALERAGITVADLDVIEANEAFAAQACA CCCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHCCCEEEECEEEECCHHHHHHHHH VSNALGLDPAKVNPNGSGISLGHPIGATGALITVKALYELQRIGGRYALVTMCIGGGQGI HHHHCCCCCCEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH AAVFERL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]