| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452673
Identifier: 126452673
GI number: 126452673
Start: 2198834
End: 2199583
Strand: Reverse
Name: 126452673
Synonym: BURPS1106A_2209
Alternate gene names: NA
Gene position: 2199583-2198834 (Counterclockwise)
Preceding gene: 126453813
Following gene: 126452675
Centisome position: 55.15
GC content: 68.0
Gene sequence:
>750_bases ATGATCCGCAGCTTTCCTACGACGTTGCCTACCTCCCGATTTTCCGTTGTCGCGTTCGCCGTTGCGCTAGCGGCGACGCT CTCCTGCGCGCCCGTCGCCGGCGTCGCGCAGACGCCGGCACCTGCCGCGACGTCGCCCGCCGCCGCAGCCGATGCGGGCG CGTTTGCCGCGCCGGCGAATTTCGACGCGCGTCAAAAAGTGCTCAATCAACGCACCGCGGAAAACGACTATCGTTATGCG GTGGCTCAGCACAATTGTTACAGCACGTTCTTCGTCAATCACTGCCTGGACAAGGCGCGCGAAACGATGCGGGCCGAGCG TGCGAACATCAGCCAGGAGCAGCTCGCGCTAGACGACGAGCAGCGGGCGGTGCGCGCGCAGGAGCGCGACCGGCAGCTCG CGCTGAAGGAAGCCGAGCGGCAGGCGCAGGCGCCGCAGCGCGCGGCGGACGAACAGGCGAACGCGGCCGCGTACGAAGGC AAGCAGCAGGAAAACGCGCTCAAGCGCGCGCAGCGCGACGCGCAGGCGCCGCAACGCGCGGTGAACCAGCAGGCGTACGA CGCGAAGCAGGCCGAATTCCAGCGCAAGCTCGACGCGGCGCATGCGCAGGCGGCCAAGGATGCGCAGCAGCGAGCGGAGA ACGCCGCACGCTACGAACAGAAGCAGCGTGATGCGGCGCAGCACAAGGCGGATGTCGACGAGCGCCAGCGGCAGGCCGCC GAGAAGGCGAAGCAAAAGCAGCAGCAGTAG
Upstream 100 bases:
>100_bases CCGGCCGGCTGCGCCGTCGGCCGGACCGGGCGGGTGAATGGAGCGGGGCATTTTGCCATAAATGCGAAAGGGTCTAGCCG CGGGTGTTAGAATTTGCCCC
Downstream 100 bases:
>100_bases CGGCTGGCAGCAGGGGTACACGCGGTAGCGTTGGGTGGTGGTTTCGCAAGGCAATCTCGGGCATGCGGGCGGCTCAGCCG GCATGCCGATTCAGTGAGGA
Product: putative lipoprotein
Products: NA
Alternate protein names: Myosin Heavy Chain
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIRSFPTTLPTSRFSVVAFAVALAATLSCAPVAGVAQTPAPAATSPAAAADAGAFAAPANFDARQKVLNQRTAENDYRYA VAQHNCYSTFFVNHCLDKARETMRAERANISQEQLALDDEQRAVRAQERDRQLALKEAERQAQAPQRAADEQANAAAYEG KQQENALKRAQRDAQAPQRAVNQQAYDAKQAEFQRKLDAAHAQAAKDAQQRAENAARYEQKQRDAAQHKADVDERQRQAA EKAKQKQQQ
Sequences:
>Translated_249_residues MIRSFPTTLPTSRFSVVAFAVALAATLSCAPVAGVAQTPAPAATSPAAAADAGAFAAPANFDARQKVLNQRTAENDYRYA VAQHNCYSTFFVNHCLDKARETMRAERANISQEQLALDDEQRAVRAQERDRQLALKEAERQAQAPQRAADEQANAAAYEG KQQENALKRAQRDAQAPQRAVNQQAYDAKQAEFQRKLDAAHAQAAKDAQQRAENAARYEQKQRDAAQHKADVDERQRQAA EKAKQKQQQ >Mature_249_residues MIRSFPTTLPTSRFSVVAFAVALAATLSCAPVAGVAQTPAPAATSPAAAADAGAFAAPANFDARQKVLNQRTAENDYRYA VAQHNCYSTFFVNHCLDKARETMRAERANISQEQLALDDEQRAVRAQERDRQLALKEAERQAQAPQRAADEQANAAAYEG KQQENALKRAQRDAQAPQRAVNQQAYDAKQAEFQRKLDAAHAQAAKDAQQRAENAARYEQKQRDAAQHKADVDERQRQAA EKAKQKQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27447; Mature: 27447
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSFPTTLPTSRFSVVAFAVALAATLSCAPVAGVAQTPAPAATSPAAAADAGAFAAPAN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC FDARQKVLNQRTAENDYRYAVAQHNCYSTFFVNHCLDKARETMRAERANISQEQLALDDE CHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH QRAVRAQERDRQLALKEAERQAQAPQRAADEQANAAAYEGKQQENALKRAQRDAQAPQRA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VNQQAYDAKQAEFQRKLDAAHAQAAKDAQQRAENAARYEQKQRDAAQHKADVDERQRQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EKAKQKQQQ HHHHHHCCC >Mature Secondary Structure MIRSFPTTLPTSRFSVVAFAVALAATLSCAPVAGVAQTPAPAATSPAAAADAGAFAAPAN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC FDARQKVLNQRTAENDYRYAVAQHNCYSTFFVNHCLDKARETMRAERANISQEQLALDDE CHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH QRAVRAQERDRQLALKEAERQAQAPQRAADEQANAAAYEGKQQENALKRAQRDAQAPQRA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VNQQAYDAKQAEFQRKLDAAHAQAAKDAQQRAENAARYEQKQRDAAQHKADVDERQRQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EKAKQKQQQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA