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The map label for this gene is pcaC [H]

Identifier: 126452606

GI number: 126452606

Start: 2243709

End: 2244107

Strand: Reverse

Name: pcaC [H]

Synonym: BURPS1106A_2257

Alternate gene names: 126452606

Gene position: 2244107-2243709 (Counterclockwise)

Preceding gene: 126453718

Following gene: 126451453

Centisome position: 56.27

GC content: 65.41

Gene sequence:

>399_bases
ATGGAGCAACGCATTTCGGAAGACCGCTACACGCGCGGCTGGAACAAGCTGAAGGAAATCGACGGCAAAGTCGGCGAGCG
CGTCGTCGCGGCGCTTGCGCCGATCGCGCCGGACTTCGGGCGGTTGCTCGTCGAATTCGGCTTCGGCGACATCTACAGCC
GGCCGCAGCTCGATTTGAAGTCGCGCGAGATCGCGACGATCGCGTCGCTCGCGACGCTCGGCCACGCCCAACCGCAGTTG
AAGGTGCATATCGAGGCGGCGCTGAACGTCGGCTGCACGCGCGACGAAATCGTCGAGGTGTTCATGCAGATGGCCTTGTA
CGCGGGTTTTCCGGCCGCGCTCAACGCGCTCTTCGCGGCGCACGACGTGTTCGGGCAACGCGACGCCGCGCATGCGTGA

Upstream 100 bases:

>100_bases
ACTCGATCGTCGAGAAGATCGCGTATTACGAGCGAGCCGAGCGCGACGCCGTTCGACAGGCGAGAACGACGACTCAATCT
CAACCGGACAAGGACGAACG

Downstream 100 bases:

>100_bases
CGAAGGCCTTCCGCGTGGCGGGGCGGCGCGCAGGCGGCGCGTTCACGCGCGAGGCGGTCGCGGCGACGCGGTAAGTCGCG
ATGCGCCGGTGGAGCGGCAC

Product: 4-carboxymuconolactone decarboxylase family protein

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MEQRISEDRYTRGWNKLKEIDGKVGERVVAALAPIAPDFGRLLVEFGFGDIYSRPQLDLKSREIATIASLATLGHAQPQL
KVHIEAALNVGCTRDEIVEVFMQMALYAGFPAALNALFAAHDVFGQRDAAHA

Sequences:

>Translated_132_residues
MEQRISEDRYTRGWNKLKEIDGKVGERVVAALAPIAPDFGRLLVEFGFGDIYSRPQLDLKSREIATIASLATLGHAQPQL
KVHIEAALNVGCTRDEIVEVFMQMALYAGFPAALNALFAAHDVFGQRDAAHA
>Mature_132_residues
MEQRISEDRYTRGWNKLKEIDGKVGERVVAALAPIAPDFGRLLVEFGFGDIYSRPQLDLKSREIATIASLATLGHAQPQL
KVHIEAALNVGCTRDEIVEVFMQMALYAGFPAALNALFAAHDVFGQRDAAHA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14509; Mature: 14509

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRISEDRYTRGWNKLKEIDGKVGERVVAALAPIAPDFGRLLVEFGFGDIYSRPQLDLK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
SREIATIASLATLGHAQPQLKVHIEAALNVGCTRDEIVEVFMQMALYAGFPAALNALFAA
HHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
HDVFGQRDAAHA
HHHHCCCCCCCC
>Mature Secondary Structure
MEQRISEDRYTRGWNKLKEIDGKVGERVVAALAPIAPDFGRLLVEFGFGDIYSRPQLDLK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
SREIATIASLATLGHAQPQLKVHIEAALNVGCTRDEIVEVFMQMALYAGFPAALNALFAA
HHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
HDVFGQRDAAHA
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]