Click here to switch to the map view.

The map label for this gene is paiB [H]

Identifier: 126452544

GI number: 126452544

Start: 1412518

End: 1413156

Strand: Reverse

Name: paiB [H]

Synonym: BURPS1106A_1455

Alternate gene names: 126452544

Gene position: 1413156-1412518 (Counterclockwise)

Preceding gene: 126454869

Following gene: 126453678

Centisome position: 35.43

GC content: 69.01

Gene sequence:

>639_bases
ATGTACGTCCCCGCTCATTTCGAAGAGAACCGCACCGACGCGCTGCACGCGCTGATCGCGCAACACCCGTTCGGCATCCT
GGTCACGCACGGCGACGGCGGACTCGACGCGAACCACATCCCGTTCGAGCTCGCGCCGGGCGAAGGCCCGCTCGGCGTAC
TGCGCGCGCACGTCGCGCGCGCGAATCCGGTCTGGCAGCAGGTGTCGGACGGCGACGAAGTCCTCGCGGTGTTCCGCGCG
GGCGACGCCTACATCTCGCCGAACTGGTATCCGAGCAAGCACGAATTGCACCGGCAGGTGCCGACCTGGAACTACGTCGT
CGTCCATGCGCACGGGCGCATCGCCGTGCGCGACGAAGCGTCGTTCGTGCGCGGCGTGGTCGCCCGCCTCACGCGCACGC
ACGAGGCGGCGCAGCCGGTGCCATGGAAGATCGGCGACGCGCCCCGGGACTACATCGACACGATGCTGCAGGCGATCGTC
GGCCTGCAGATCGACATCACGCGGCTCGTCGGCAAATGCAAGCTCGGCCAGAACAAGGACGCGCGCGACATCCGCGGCGC
GGGCCAAGCGCTGAAGGCGCGCGGCGACGACGCGATCGGCAATCGGATGCTCGCGAAGGCCGCCGAAAAGCCCGAATAG

Upstream 100 bases:

>100_bases
ATTCAAACTGGTTCTACAGAATAAACCGGTTCGGGACGACAATAGCCGCACCGTTCAATCCCGATGCGCCGCGCGAACGC
GGCCGAACCGTGGAGCCGCC

Downstream 100 bases:

>100_bases
GCGCAATGATCGCGCCGGACGCGTTGCATCCGGATGCGTTTCATTCCGCGATCCGGACCGTCGGCGTTGCATGCGACGCC
GGACTCGCCGCCCGCGCTCG

Product: FMN-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MYVPAHFEENRTDALHALIAQHPFGILVTHGDGGLDANHIPFELAPGEGPLGVLRAHVARANPVWQQVSDGDEVLAVFRA
GDAYISPNWYPSKHELHRQVPTWNYVVVHAHGRIAVRDEASFVRGVVARLTRTHEAAQPVPWKIGDAPRDYIDTMLQAIV
GLQIDITRLVGKCKLGQNKDARDIRGAGQALKARGDDAIGNRMLAKAAEKPE

Sequences:

>Translated_212_residues
MYVPAHFEENRTDALHALIAQHPFGILVTHGDGGLDANHIPFELAPGEGPLGVLRAHVARANPVWQQVSDGDEVLAVFRA
GDAYISPNWYPSKHELHRQVPTWNYVVVHAHGRIAVRDEASFVRGVVARLTRTHEAAQPVPWKIGDAPRDYIDTMLQAIV
GLQIDITRLVGKCKLGQNKDARDIRGAGQALKARGDDAIGNRMLAKAAEKPE
>Mature_212_residues
MYVPAHFEENRTDALHALIAQHPFGILVTHGDGGLDANHIPFELAPGEGPLGVLRAHVARANPVWQQVSDGDEVLAVFRA
GDAYISPNWYPSKHELHRQVPTWNYVVVHAHGRIAVRDEASFVRGVVARLTRTHEAAQPVPWKIGDAPRDYIDTMLQAIV
GLQIDITRLVGKCKLGQNKDARDIRGAGQALKARGDDAIGNRMLAKAAEKPE

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=159, Percent_Identity=31.4465408805031, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23259; Mature: 23259

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVPAHFEENRTDALHALIAQHPFGILVTHGDGGLDANHIPFELAPGEGPLGVLRAHVAR
CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHH
ANPVWQQVSDGDEVLAVFRAGDAYISPNWYPSKHELHRQVPTWNYVVVHAHGRIAVRDEA
CCHHHHHHCCCCCEEEEEECCCCEECCCCCCCHHHHHHCCCCCCEEEEEECCEEEEECHH
SFVRGVVARLTRTHEAAQPVPWKIGDAPRDYIDTMLQAIVGLQIDITRLVGKCKLGQNKD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCC
ARDIRGAGQALKARGDDAIGNRMLAKAAEKPE
HHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYVPAHFEENRTDALHALIAQHPFGILVTHGDGGLDANHIPFELAPGEGPLGVLRAHVAR
CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHH
ANPVWQQVSDGDEVLAVFRAGDAYISPNWYPSKHELHRQVPTWNYVVVHAHGRIAVRDEA
CCHHHHHHCCCCCEEEEEECCCCEECCCCCCCHHHHHHCCCCCCEEEEEECCEEEEECHH
SFVRGVVARLTRTHEAAQPVPWKIGDAPRDYIDTMLQAIVGLQIDITRLVGKCKLGQNKD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCC
ARDIRGAGQALKARGDDAIGNRMLAKAAEKPE
HHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]