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The map label for this gene is yajC [H]

Identifier: 126452530

GI number: 126452530

Start: 3283781

End: 3284107

Strand: Direct

Name: yajC [H]

Synonym: BURPS1106A_3363

Alternate gene names: 126452530

Gene position: 3283781-3284107 (Clockwise)

Preceding gene: 126451936

Following gene: 126454226

Centisome position: 82.33

GC content: 61.16

Gene sequence:

>327_bases
GTGTCGTTTATTCCCAATGCCTATGCGCAAGGCGCAGCGGGCGGTGCCGAATCGAGCCTGATGAGCTTCCTGCCGCTCAT
CCTGATGTTCGCGGTGCTCTACTTCATCATGATCCGCCCGCAGATGAAGCGGCAAAAGGAGCATCGCAACATGCTCGCCG
CGATGGCGAAGGGCGACGAAGTGGTGACGAGCGGCGGGCTCGTCGGCAAGGTGACGAAGGTCTCGGAAGCGTACATCGGC
GTCGAGATCGCCGAAGGCACCGAGATCACCGTGCAGAAGGCGGCCGTCACGACCATTCTGCCGAAGGGCACGATCAAGTC
GCTGTAA

Upstream 100 bases:

>100_bases
AATAGCTTGAAACCAAAGCGCATTTGCGCCGCTGTCGCGGATAGGGCCGGTGGTAGAATAACCGGCTTATTTTTCGATCT
TCCCTAACGGAGAGACCAAC

Downstream 100 bases:

>100_bases
GCCCCGCGGCGCGTCCGGCCGCCCGACGCCCGCGCCGCGAAGCGCGCGGCCGAGGCCGGCGCCGCACGCGCCGCCATTCC
AGCCAACCATCCCGTTCGGC

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSFIPNAYAQGAAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEVVTSGGLVGKVTKVSEAYIG
VEIAEGTEITVQKAAVTTILPKGTIKSL

Sequences:

>Translated_108_residues
MSFIPNAYAQGAAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEVVTSGGLVGKVTKVSEAYIG
VEIAEGTEITVQKAAVTTILPKGTIKSL
>Mature_107_residues
SFIPNAYAQGAAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEVVTSGGLVGKVTKVSEAYIGV
EIAEGTEITVQKAAVTTILPKGTIKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=42.7272727272727, Blast_Score=99, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11535; Mature: 11404

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIPNAYAQGAAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDE
CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
VVTSGGLVGKVTKVSEAYIGVEIAEGTEITVQKAAVTTILPKGTIKSL
EEECCCCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFIPNAYAQGAAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDE
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
VVTSGGLVGKVTKVSEAYIGVEIAEGTEITVQKAAVTTILPKGTIKSL
EEECCCCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]