Click here to switch to the map view.

The map label for this gene is flhD [C]

Identifier: 126452525

GI number: 126452525

Start: 3155946

End: 3156179

Strand: Reverse

Name: flhD [C]

Synonym: BURPS1106A_3246

Alternate gene names: 126452525

Gene position: 3156179-3155946 (Counterclockwise)

Preceding gene: 126451595

Following gene: 126451658

Centisome position: 79.13

GC content: 66.67

Gene sequence:

>234_bases
ATGGAACAGCAAAAGGACGTGTTCGAAGAGATCGCGGCATTCAATCAGCGGTATCTGCGGCTCGTGCGGCGCTGGCTGTG
CGAGGACGCCGAACGCGCCCGGACCGTGCTCGGCATTTCCGGAGAACTGGCGATTCGCCTTGCCGCGATGACGCCGACGC
AGCTCGAACAGCTGGCGGACAGCGGCGAGCTCGTTTGCCGGCTCCGGGCCGACGCGATGCCGGGGCGCGCGTAA

Upstream 100 bases:

>100_bases
TGCATGCGTTAGCCTTCGAGGGCGAATGCGCATCGGGTAGACGCGCGCGTTTGCGAGAACGTTTGCGGGCAGATGCGTTC
ATCATTGAAACGGGGCAGGC

Downstream 100 bases:

>100_bases
GCGCTGAGCGATCGAGGTTCGAGCACGCGCTCGTGCTTCGCCGGACGCCATCAACGATTAGCGTACGCGTGGCTGGCGAA
ACAAGCCGTTGTCGGCGTCC

Product: FlhD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MEQQKDVFEEIAAFNQRYLRLVRRWLCEDAERARTVLGISGELAIRLAAMTPTQLEQLADSGELVCRLRADAMPGRA

Sequences:

>Translated_77_residues
MEQQKDVFEEIAAFNQRYLRLVRRWLCEDAERARTVLGISGELAIRLAAMTPTQLEQLADSGELVCRLRADAMPGRA
>Mature_77_residues
MEQQKDVFEEIAAFNQRYLRLVRRWLCEDAERARTVLGISGELAIRLAAMTPTQLEQLADSGELVCRLRADAMPGRA

Specific function: Transcriptional Activator. Involved In The Regulation Of A Number Of Genetic Systems. Together With Flhc It Acts As An Activator Of Class 2 Flagellar Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8749; Mature: 8749

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQKDVFEEIAAFNQRYLRLVRRWLCEDAERARTVLGISGELAIRLAAMTPTQLEQLAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCCHHHHHHHHC
SGELVCRLRADAMPGRA
CCHHEEEECCCCCCCCC
>Mature Secondary Structure
MEQQKDVFEEIAAFNQRYLRLVRRWLCEDAERARTVLGISGELAIRLAAMTPTQLEQLAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCCHHHHHHHHC
SGELVCRLRADAMPGRA
CCHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA