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The map label for this gene is iolB [H]

Identifier: 126452492

GI number: 126452492

Start: 1627657

End: 1628460

Strand: Reverse

Name: iolB [H]

Synonym: BURPS1106A_1674

Alternate gene names: 126452492

Gene position: 1628460-1627657 (Counterclockwise)

Preceding gene: 126454709

Following gene: 126453939

Centisome position: 40.83

GC content: 70.15

Gene sequence:

>804_bases
ATGAGTCTGCTCGTCAAGGGCGCGGGCGACGGCATGTCGATCGCGCGCGTCACGCCGGAATCGGCGCACTGGAAACACGT
CGGCTTCGCCGCGTACCGGCTGAAGGCGGGCGAGGCGATCGCGCTCGCCGAGGCCGCGCGCGAGATGTGCATCGTCGTGC
TCACCGGCACCGTCGACATCGAGGCGGGCGACGGCACGCGCTGGACCGCGCTCGGCTCGCGCGACAGCGTGTTCGACGGC
GTCGCGCCGTACGCGCTGTACCTGCCGCCGAAGCTGTCCGTCATCGTGCGCGCGTCGCGCGACGCGGAGCTCGGCGTGGC
GAGCGCGCCGGCGGCCGGCCGCTATCCGGCGCGGCTCATCAAGCCGTCGCAGATGCGGCGCTCGGTGCGCGGCAGCGGCG
CGAACACGCGCTACGTCTGCGATATCCTGCCGCAGACCGAGCCGGCGGAGGCGCTGCTCGTCGTCGAGGTGCGCACGCCT
TCCGGGCACTCGTCGAGCTATCCGCCGCACAAGCACGACACCGACAACGTGCCCGTCGAGAGCTCGCTCGAGGAAACGTA
CTACCACCGCGTGCATCCGCCGCAGGGCTTCGTGTTCCAGCGCGTGTACACCGATTCGCGCGACCTCGACGAATCGATGG
CCGCCGGCGACCACGACGTCGTGCTGGTGCCGCGCGGCTATCATCCGGTTGTCGTGCCCTACGGGTATGAGTCGTACTAT
CTGAACGTGATGGCGGGGCCGACGCGCGTGTGGCACTTCAAGAACGATCCCGCGCACGAGTGGATGCTGAACGGCGGGCG
GTGA

Upstream 100 bases:

>100_bases
CCGTCGCGCCGAGCTACGCGTATGCGCAAAAGGGCTACCGGACGCTGCGCGCGCTCGTCGACGCGCCGCTCCCGCCCGTC
GGTCACAAGGAGGCGGCGTA

Downstream 100 bases:

>100_bases
CGGCCGAACGACGCTCCGCCGACGCCGCCGCGCCGCGCGGGCAGCCGGCGAACCGCGCACACGCGGCCGACGCGGCACCG
GCGCACGCCGTCCAATCGAC

Product: myo-inositol catabolism protein IolB

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSLLVKGAGDGMSIARVTPESAHWKHVGFAAYRLKAGEAIALAEAAREMCIVVLTGTVDIEAGDGTRWTALGSRDSVFDG
VAPYALYLPPKLSVIVRASRDAELGVASAPAAGRYPARLIKPSQMRRSVRGSGANTRYVCDILPQTEPAEALLVVEVRTP
SGHSSSYPPHKHDTDNVPVESSLEETYYHRVHPPQGFVFQRVYTDSRDLDESMAAGDHDVVLVPRGYHPVVVPYGYESYY
LNVMAGPTRVWHFKNDPAHEWMLNGGR

Sequences:

>Translated_267_residues
MSLLVKGAGDGMSIARVTPESAHWKHVGFAAYRLKAGEAIALAEAAREMCIVVLTGTVDIEAGDGTRWTALGSRDSVFDG
VAPYALYLPPKLSVIVRASRDAELGVASAPAAGRYPARLIKPSQMRRSVRGSGANTRYVCDILPQTEPAEALLVVEVRTP
SGHSSSYPPHKHDTDNVPVESSLEETYYHRVHPPQGFVFQRVYTDSRDLDESMAAGDHDVVLVPRGYHPVVVPYGYESYY
LNVMAGPTRVWHFKNDPAHEWMLNGGR
>Mature_266_residues
SLLVKGAGDGMSIARVTPESAHWKHVGFAAYRLKAGEAIALAEAAREMCIVVLTGTVDIEAGDGTRWTALGSRDSVFDGV
APYALYLPPKLSVIVRASRDAELGVASAPAAGRYPARLIKPSQMRRSVRGSGANTRYVCDILPQTEPAEALLVVEVRTPS
GHSSSYPPHKHDTDNVPVESSLEETYYHRVHPPQGFVFQRVYTDSRDLDESMAAGDHDVVLVPRGYHPVVVPYGYESYYL
NVMAGPTRVWHFKNDPAHEWMLNGGR

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 29214; Mature: 29083

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLVKGAGDGMSIARVTPESAHWKHVGFAAYRLKAGEAIALAEAAREMCIVVLTGTVDI
CEEEEECCCCCEEEEEECCCCCCEEECCEEEEEECCCCEEHHHHHCCCEEEEEEEEEEEE
EAGDGTRWTALGSRDSVFDGVAPYALYLPPKLSVIVRASRDAELGVASAPAAGRYPARLI
ECCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCEECCCCCCCCCHHHC
KPSQMRRSVRGSGANTRYVCDILPQTEPAEALLVVEVRTPSGHSSSYPPHKHDTDNVPVE
CHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
SSLEETYYHRVHPPQGFVFQRVYTDSRDLDESMAAGDHDVVLVPRGYHPVVVPYGYESYY
CCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCEEEECCCCEEE
LNVMAGPTRVWHFKNDPAHEWMLNGGR
EEEEECCEEEEEECCCCHHHEEECCCC
>Mature Secondary Structure 
SLLVKGAGDGMSIARVTPESAHWKHVGFAAYRLKAGEAIALAEAAREMCIVVLTGTVDI
EEEEECCCCCEEEEEECCCCCCEEECCEEEEEECCCCEEHHHHHCCCEEEEEEEEEEEE
EAGDGTRWTALGSRDSVFDGVAPYALYLPPKLSVIVRASRDAELGVASAPAAGRYPARLI
ECCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCEECCCCCCCCCHHHC
KPSQMRRSVRGSGANTRYVCDILPQTEPAEALLVVEVRTPSGHSSSYPPHKHDTDNVPVE
CHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
SSLEETYYHRVHPPQGFVFQRVYTDSRDLDESMAAGDHDVVLVPRGYHPVVVPYGYESYY
CCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCEEEECCCCEEE
LNVMAGPTRVWHFKNDPAHEWMLNGGR
EEEEECCEEEEEECCCCHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA