| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452472
Identifier: 126452472
GI number: 126452472
Start: 3767644
End: 3768051
Strand: Direct
Name: 126452472
Synonym: BURPS1106A_3868
Alternate gene names: NA
Gene position: 3767644-3768051 (Clockwise)
Preceding gene: 126454763
Following gene: 126453152
Centisome position: 94.46
GC content: 69.36
Gene sequence:
>408_bases ATGCGTTTTTGCCGAACGACTCACCTTGGATCGCCCATGAAATCGACTCAGATTCTCGCCAGCTGCGCGCTCGTCGGCGC CGTGGCGGCGCTCGCCGGTTGCGCAGGCTCGCCCGCGAACGGCCCGCAGGCCGAATCGCCCAGCGGCCGGATCATCTATG TCGCATCGCCGCGCAGCCCGCACGATGTCGAAAGCTGCCTGACGAGCCGCGTGTCGCAGGCGCGCGTCGCGCAGCGCAAC CCGACGACGGTCCTGATCGGCCCGTACTCGGCCGATTCGGACTGGACCGTCACGCTCGCGCCTACCGCGTCGTCCGGCAC GACCATCGGCGTCTATCGCCCGCGCAGCGGCGACGGGGATCCGGAGGAATCCGAGCTGCGCTTCCATATCGCGCGCTGCG CGGTCTGA
Upstream 100 bases:
>100_bases ATTCGCGTGCCTTGTTAGGCTCGCGGCACGATCGGATTTTTCCTCAATCGTTTCGGCGCGCCGCCGCGCATCGGACCGAC GCGAAACGCATGGAATCCGG
Downstream 100 bases:
>100_bases CACGCCTCGCACGCGGCGCGCCGACGTGCGCGTTCGCATTGAGATCGCGCGGCCGATTGGCGCTGCGCGATCGATGCTCT TTCCATACTCTTCCTCGCCG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGRIIYVASPRSPHDVESCLTSRVSQARVAQRN PTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHIARCAV
Sequences:
>Translated_135_residues MRFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGRIIYVASPRSPHDVESCLTSRVSQARVAQRN PTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHIARCAV >Mature_135_residues MRFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGRIIYVASPRSPHDVESCLTSRVSQARVAQRN PTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHIARCAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14058; Mature: 14058
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGRIIYVASPRSP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCC HDVESCLTSRVSQARVAQRNPTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGD HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCC PEESELRFHIARCAV CCCHHHEEEEEECCC >Mature Secondary Structure MRFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGRIIYVASPRSP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCC HDVESCLTSRVSQARVAQRNPTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGD HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCC PEESELRFHIARCAV CCCHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA