| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is fbpB2 [H]
Identifier: 126452442
GI number: 126452442
Start: 1353472
End: 1355184
Strand: Reverse
Name: fbpB2 [H]
Synonym: BURPS1106A_1381
Alternate gene names: 126452442
Gene position: 1355184-1353472 (Counterclockwise)
Preceding gene: 126454996
Following gene: 126453358
Centisome position: 33.98
GC content: 74.84
Gene sequence:
>1713_bases TTGACAACTGAGGCCGACGCGCGCGTCGCGCGCCGCGCACACGCGCCGGTATGGGCGCGCGCCGGCGGGCGCGCGCGCCT TTCGCGCATCGCCGCGCACGGCTGGCTCGCCGGCGCGGCGGCGATCGCGGCCGTCGTCGGCACGCCGCTCGTCGCGCTCG CGTGCGCGGCGCTCGGCGCCGACCTGTCGCACTGGCGGCACCTGGCCGAATTCGTGCTGCCGCAGGCGGCCGCGAACACG CTCGCGCTGCTCGCGGGCGTCGGCGTGATCGTCACGTGCGTCGGCACGGGCGCCGCGTGGCTCGTCACCGCCTACGATTT TCCCGGCCGCCGCACGCTCGCGTGGGCGCTGCTGCTACCGCTCGCGGTGCCGTCGTACATCGTCGCGTTCGCGTATCTCG ACCTGCTGCACCCGATCGGGCCCGTGCAGTCCGCGCTGCGCTGGGCGCTCGGCTTCGACAGCCCGCGCGAATTCCGTCTG CCCGAGCTGCGCTCGCTGCCGGGCGCGATCGTCGTGCTCGGCTTCGTGCTGTATCCGTACGTCTATCTGTGCACGCGCGC GATGTTCGTCACGCAATCGGCAAGCCTCGTCGAAGCCGCGCGCACGCTCGGCGCGGGCCGCATCGAAACCTTCGTTCGCG TCGTGCTGCCGCTCGCGCGGCCGGCGATCGCGGTCGGCGCGAGCCTCGCGCTGCTCGAGACGCTGAACGACGTCGGCGCG TCCGAGTTCCTCGGCGTGCAAACCCTCACCGTGTCCGTCTACACGACGTGGGTCACGCGCTCCGATCTCGCGAGCGCCGC GCAGATCGCGCTCGCGATGCTCGCGATCGTGCTCGGCGCGCTCGCGCTCGAACGCTACGGCCGCCGCCGCGAACGCTACG CGCACGGCCGCCGAATGCGCGCGATCGCGCCGCGCCGGCTGCGCGGCGCGGCCGCCGCCGGGGCGGCCGTGCTCGGCTGG CTGCCCGTCGCCGTCGGCTTCGGCGCGCCCGCCGCGTATCTCGTGCACGAAACCGCGCAACGCGTGCACCTCGTCGGCGG CGTATCGGCCCAGTTGCTCGCGAGCCTGGGCAACACGCTCGCCGTCGCGCTCACCGCGACCGTCGTCACGCTCGGCGGCG GCATCGTCGTCGCGTGGGCGACGCGCCGCACGCGCGACAGCGCGCGGTTCCAGCCGGGCCGCGTCTGCGCGCGGCTCGCG AGCGTCGGCTACGCGGTGCCGGGCACGGTGCTCGCGATCGGCCTGCTCGCGCCGCTCGCGCTCGCCGATCGCGCGATCGC CGCCGTGCTCGGCCGCGATGCGCTCGTGCTGATGGGCTCGGCCGCCGCGCTCGTGATCGCGTATGCGATCCGCTTCCTCG CGATTCCCGCGGGCGGCATCGAGGCCGGCCTCGCGCGCATTCCGGCGTCGCTCGAACAGGCGTCGCGCACGCTCGGCGAA TCGGCGGGCATGACCCTGCGGCGCGTGCACCTGCCGCTGCTGCGCCCCGCGCTCGGCGCGAGCGCGCTGCTCGTGTTCGT CGACGCGATGAAAGAGCTGCCCGCGACGCTGCTGCTGCGCCCGCTCAACTTCGACACGCTCGCCACCTGGCTCTATGCGG AGGCCGCGCGCGGCACCTACGAGGAAGGCGCGGTCGCGGCGCTCGCGATCGTCGCCGCGGGCCTCGCGCCCGTGATCGTG CTGGCGCGCACCCAACTGAAATCCGGATCCTGA
Upstream 100 bases:
>100_bases GTGATCGCCGGCTTCGGGCCGCTGAAGGTCGATCCGCTGCCGCTCGTCGAGATCGCGAAGTACCGCAAGCGCGCCAGCCA GCTCGTCGACAAGGTCGGCT
Downstream 100 bases:
>100_bases GATGCCCGCCATGCTGCTCGAACTGAACGCCGTCACGCTCGCCTACGACACGCCGCGCGGCCGGCGCACGATCGTCGATC GCCTGAGCCTCGCGCTCGAG
Product: iron ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGADLSHWRHLAEFVLPQAAANT LALLAGVGVIVTCVGTGAAWLVTAYDFPGRRTLAWALLLPLAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRL PELRSLPGAIVVLGFVLYPYVYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMRAIAPRRLRGAAAAGAAVLGW LPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTLAVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLA SVGYAVPGTVLAIGLLAPLALADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVAAGLAPVIV LARTQLKSGS
Sequences:
>Translated_570_residues MTTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGADLSHWRHLAEFVLPQAAANT LALLAGVGVIVTCVGTGAAWLVTAYDFPGRRTLAWALLLPLAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRL PELRSLPGAIVVLGFVLYPYVYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMRAIAPRRLRGAAAAGAAVLGW LPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTLAVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLA SVGYAVPGTVLAIGLLAPLALADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVAAGLAPVIV LARTQLKSGS >Mature_569_residues TTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGADLSHWRHLAEFVLPQAAANTL ALLAGVGVIVTCVGTGAAWLVTAYDFPGRRTLAWALLLPLAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRLP ELRSLPGAIVVLGFVLYPYVYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGAS EFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMRAIAPRRLRGAAAAGAAVLGWL PVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTLAVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLAS VGYAVPGTVLAIGLLAPLALADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGES AGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVAAGLAPVIVL ARTQLKSGS
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 59275; Mature: 59144
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50928 ABC_TM1 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGA CCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLSHWRHLAEFVLPQAAANTLALLAGVGVIVTCVGTGAAWLVTAYDFPGRRTLAWALLLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH LAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRLPELRSLPGAIVVLGFVLYPY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH VYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA HHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMR HHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AIAPRRLRGAAAAGAAVLGWLPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH AVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLASVGYAVPGTVLAIGLLAPLA HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE HHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHCCCC EEGAVAALAIVAAGLAPVIVLARTQLKSGS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTEADARVARRAHAPVWARAGGRARLSRIAAHGWLAGAAAIAAVVGTPLVALACAALGA CCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLSHWRHLAEFVLPQAAANTLALLAGVGVIVTCVGTGAAWLVTAYDFPGRRTLAWALLLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH LAVPSYIVAFAYLDLLHPIGPVQSALRWALGFDSPREFRLPELRSLPGAIVVLGFVLYPY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH VYLCTRAMFVTQSASLVEAARTLGAGRIETFVRVVLPLARPAIAVGASLALLETLNDVGA HHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH SEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVLGALALERYGRRRERYAHGRRMR HHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AIAPRRLRGAAAAGAAVLGWLPVAVGFGAPAAYLVHETAQRVHLVGGVSAQLLASLGNTL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH AVALTATVVTLGGGIVVAWATRRTRDSARFQPGRVCARLASVGYAVPGTVLAIGLLAPLA HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LADRAIAAVLGRDALVLMGSAAALVIAYAIRFLAIPAGGIEAGLARIPASLEQASRTLGE HHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH SAGMTLRRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHCCCC EEGAVAALAIVAAGLAPVIVLARTQLKSGS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]