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The map label for this gene is 126452423

Identifier: 126452423

GI number: 126452423

Start: 2275114

End: 2276253

Strand: Reverse

Name: 126452423

Synonym: BURPS1106A_2292

Alternate gene names: NA

Gene position: 2276253-2275114 (Counterclockwise)

Preceding gene: 126452308

Following gene: 126453081

Centisome position: 57.07

GC content: 73.68

Gene sequence:

>1140_bases
ATGGACTGTAACGAAACGCGTGCGCTGCTCGGCGCGGATGTCGACCACGAGCTTTCCGCGGCCGATGCGTGGCGGATCGC
GCGGCACGTCGGCGGATGCGGCGCGTGCCGTCTCGAGCGCGAGCGGCTCGTCGCGCTTCGCCGCGCGATGCGGCAGGCGG
AGTACCATCGCGCGCCGGGCGCGCTGCGCGCCCGCATTGCCGCGGGCTTGCCGTTGGCGGCGGCGCCGTTCGCGCAAGCG
CCGGTTCAGGATCTGCCCGCTTCGGACGTGCCGGTCTCGGACGTGCCGGTCTCGGACGTGCCGGTTTCGGACATGCCGGT
CTCGGACGTGCCGGTTTCGGACATGCCGGTTTCGGACATGCCGGTCTCGGACGTGCCGGTTTCGGACGTGCCGGTTTCGG
ACATGCCGGTCTCGGATGTGCCGGTCTCGGATGCGCCTGAACAGGACACGCCCTCGCAGGACATGCGCGCGCCCAACAAA
CCGGCGGTGGATCGCCCCCCCGAAGCGAAGCCGAGGTTCGGCGCCGACGCGCGCGGCGGCGCGCGGGCGGGCCGCTGGTT
CGCGCGGCCGGGCTCGCGCGGCCCGACGCTTGATCGGCCGGGGCCGGGGCCGCGCGCCGCGGCACTGCCCGGCCTGGGCT
GGGGCGTCGCGCTGACGGTCGCGCTGGCGGCCGCGGCCGGCTTCGCGCTCGATGCGCGCCGCGCGGCGACGGAGCACGCC
GTCGACGAAATCGTCGCGAGCCACGTGCGAGCCGGGCTGTCGTCACGGGACATCGACGTGATCTCGACCGATCGCCATAC
CGTCAAGCCGTGGTTCAACGGCCGCCTCGATTTCGCGCCACCCGTCGTCGACCTGAGCGCAAGCGGCTTCGCGCTGGCGG
GCGGCCGGCTCGACTATGTCGGGCAGCGCCGCGTCGCGGTGCTCGTCTACCGCTACCGGCAGCATGTGATCGACGTCTAC
GTGTGGCCGTCGGGCGAGGGCGGGGCGAGGCCCTACGCGACCGTGTCGCAGGGTTATGCGCTCGATCGCTGGGAGGCGGC
CGGCATGACGTGGTGGGCGGTAACCGACGCGGAGCCGTCCGCGCTCGCGGCGTTCAGGACGGCGCTCGATGCGCGCGTGG
CCGCGCCGCGAACCGAGTGA

Upstream 100 bases:

>100_bases
GCGCCCGCGTCGCGGTCGGCCGCACAGGGGCACCCGGGCGAGCGCGCGGCGCAGCGCGAACGCGGCGCGCCGGCATCCGG
AACCGCATCGGAGGCCATCG

Downstream 100 bases:

>100_bases
CGGCGTTTTGGCGATGCGACCCCGCCCCGGGCCGGCGGTGCCCGCGCGGCTGCCGCGCCGGCGTGGCCGGCCGAACGCCC
GCCGGTCTGCCCAAGTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Protein

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPGALRARIAAGLPLAAAPFAQA
PVQDLPASDVPVSDVPVSDVPVSDMPVSDVPVSDMPVSDMPVSDVPVSDVPVSDMPVSDVPVSDAPEQDTPSQDMRAPNK
PAVDRPPEAKPRFGADARGGARAGRWFARPGSRGPTLDRPGPGPRAAALPGLGWGVALTVALAAAAGFALDARRAATEHA
VDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVVDLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVY
VWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPSALAAFRTALDARVAAPRTE

Sequences:

>Translated_379_residues
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPGALRARIAAGLPLAAAPFAQA
PVQDLPASDVPVSDVPVSDVPVSDMPVSDVPVSDMPVSDMPVSDVPVSDVPVSDMPVSDVPVSDAPEQDTPSQDMRAPNK
PAVDRPPEAKPRFGADARGGARAGRWFARPGSRGPTLDRPGPGPRAAALPGLGWGVALTVALAAAAGFALDARRAATEHA
VDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVVDLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVY
VWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPSALAAFRTALDARVAAPRTE
>Mature_379_residues
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPGALRARIAAGLPLAAAPFAQA
PVQDLPASDVPVSDVPVSDVPVSDMPVSDVPVSDMPVSDMPVSDVPVSDVPVSDMPVSDVPVSDAPEQDTPSQDMRAPNK
PAVDRPPEAKPRFGADARGGARAGRWFARPGSRGPTLDRPGPGPRAAALPGLGWGVALTVALAAAAGFALDARRAATEHA
VDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVVDLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVY
VWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPSALAAFRTALDARVAAPRTE

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40171; Mature: 40171

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPG
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
ALRARIAAGLPLAAAPFAQAPVQDLPASDVPVSDVPVSDVPVSDMPVSDVPVSDMPVSDM
HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVSDVPVSDVPVSDMPVSDVPVSDAPEQDTPSQDMRAPNKPAVDRPPEAKPRFGADARGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
ARAGRWFARPGSRGPTLDRPGPGPRAAALPGLGWGVALTVALAAAAGFALDARRAATEHA
CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVVDLSASGFALAGGRLDYV
HHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCCEEEECCCCEEEECCCCCCC
GQRRVAVLVYRYRQHVIDVYVWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPS
CCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCEEHHCCCEECCHHHCCEEEEEEECCCHH
ALAAFRTALDARVAAPRTE
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPG
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
ALRARIAAGLPLAAAPFAQAPVQDLPASDVPVSDVPVSDVPVSDMPVSDVPVSDMPVSDM
HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVSDVPVSDVPVSDMPVSDVPVSDAPEQDTPSQDMRAPNKPAVDRPPEAKPRFGADARGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
ARAGRWFARPGSRGPTLDRPGPGPRAAALPGLGWGVALTVALAAAAGFALDARRAATEHA
CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVVDLSASGFALAGGRLDYV
HHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCCEEEECCCCEEEECCCCCCC
GQRRVAVLVYRYRQHVIDVYVWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPS
CCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCEEHHCCCEECCHHHCCEEEEEEECCCHH
ALAAFRTALDARVAAPRTE
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA