| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452407
Identifier: 126452407
GI number: 126452407
Start: 2304233
End: 2304550
Strand: Reverse
Name: 126452407
Synonym: BURPS1106A_2329
Alternate gene names: NA
Gene position: 2304550-2304233 (Counterclockwise)
Preceding gene: 126451726
Following gene: 126453299
Centisome position: 57.78
GC content: 72.64
Gene sequence:
>318_bases ATGCGCGAACCCACCGCCGACGTCGCGTCGCTCCCGTCTCCGATCCATCCGGGCGTCATTCGAGTGTCGGGCGGCGTCTA CGGCGGGATTCGACGTTGCGCGGAAATCGGCATTCGGATGCCCGATCGCGCGGCGATGCGCGCCGTCGGCGTTCGGCGCG GCTATCGTCAGGCAAAAAGCAGTATAGGACGCGCGCCGCGATTAGCCAGCGTCCTGTCGGCCGCCCGCGTGGCCGCGGCG TGCGACGGCGGCCGGGCTGCGTGTGGCCGCGTGCCGCGGCGAACCACGGCGGCTCGTGCGCCGCACGAGGGCGCGTGA
Upstream 100 bases:
>100_bases TTCCCAAAACGGTCGAATAGTGGCGATTCCAGCGCTCGATGAGCGCGCGGATCGTCGATTCCTTGGGGAACACTTTGCGC TCCTTGCATTCAGGTGGAGC
Downstream 100 bases:
>100_bases GGCGGAGCGACGGCCGCCGGATGCCCGATCGGTTACGCGTTTCACGCCCGCCCCGCGCGCTGTCGCCTCCCCGGACTTCG CGCGGGACCCATCGGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MREPTADVASLPSPIHPGVIRVSGGVYGGIRRCAEIGIRMPDRAAMRAVGVRRGYRQAKSSIGRAPRLASVLSAARVAAA CDGGRAACGRVPRRTTAARAPHEGA
Sequences:
>Translated_105_residues MREPTADVASLPSPIHPGVIRVSGGVYGGIRRCAEIGIRMPDRAAMRAVGVRRGYRQAKSSIGRAPRLASVLSAARVAAA CDGGRAACGRVPRRTTAARAPHEGA >Mature_105_residues MREPTADVASLPSPIHPGVIRVSGGVYGGIRRCAEIGIRMPDRAAMRAVGVRRGYRQAKSSIGRAPRLASVLSAARVAAA CDGGRAACGRVPRRTTAARAPHEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10886; Mature: 10886
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREPTADVASLPSPIHPGVIRVSGGVYGGIRRCAEIGIRMPDRAAMRAVGVRRGYRQAKS CCCCCCCHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SIGRAPRLASVLSAARVAAACDGGRAACGRVPRRTTAARAPHEGA HHCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MREPTADVASLPSPIHPGVIRVSGGVYGGIRRCAEIGIRMPDRAAMRAVGVRRGYRQAKS CCCCCCCHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SIGRAPRLASVLSAARVAAACDGGRAACGRVPRRTTAARAPHEGA HHCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA