Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126452381

Identifier: 126452381

GI number: 126452381

Start: 2286007

End: 2286531

Strand: Direct

Name: 126452381

Synonym: BURPS1106A_2306

Alternate gene names: NA

Gene position: 2286007-2286531 (Clockwise)

Preceding gene: 126452890

Following gene: 126451535

Centisome position: 57.32

GC content: 68.38

Gene sequence:

>525_bases
ATGGGAGGATGTCGGTGCGTTCATGGCCGCGATTGTAACGGCAGCCGGCCGCCCTTCGGCAAGCGCGGTGTGTTCCCGGG
TGCACGCTCGCGCTCGCGCGCGCCGCTCCCGCCGGTTGCGCGACGCGCGAGCGCATGCCGCCGCGGGCGCGCGCACGTCC
GCGCGATGCACGCGCGACTCGCGAAACCACCTTCGCGCCGCCGGCTCGCGTTATCTCGAAATAGACAAAATCGCCGGAAC
CGCCCGCCGCCGCGGCCCGAACAACGCGCGCGGCAGCGGTCGCGGACCGCCGGCCCGAAACGCCTGCGGCACGGCGTTTT
CAGCCTTGCGGATACATTTCGGCGGCCTCCGTGCGAGCGCCTCCGAAGCACGGCCGCCGCGCGAAAATTAGCGCGCCGCT
CGTTTTCCCGCAGTATTTTGTCGTTTCAGCGCCGATTTGCCATAATGCAAACCGCGACCCGCGCTGCCGCGCGATTCGCG
GCTTATCGAACAACATGTAGTCCACCCACTGGGAGTGTCCAATGA

Upstream 100 bases:

>100_bases
TCTGCGCGGCGTCGGGCGCCGCGCCCGCGATCGTGCCGCCCGTCGCGAGGACGGCGATGCGCGGCAGCGCGCGCGGCGCC
GGGTTCGAAACGTGAGGGGA

Downstream 100 bases:

>100_bases
AGATCCGATCGCTGATGGCCGCGCTGCTCGTCGGCGGCGTGCTGGCAACGCCTGCTTTCGCCGCAAACAGCCAGCAGGAC
AAGATGAAGGCATGCAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MGGCRCVHGRDCNGSRPPFGKRGVFPGARSRSRAPLPPVARRASACRRGRAHVRAMHARLAKPPSRRRLALSRNRQNRRN
RPPPRPEQRARQRSRTAGPKRLRHGVFSLADTFRRPPCERLRSTAAARKLARRSFSRSILSFQRRFAIMQTATRAAARFA
AYRTTCSPPTGSVQ

Sequences:

>Translated_174_residues
MGGCRCVHGRDCNGSRPPFGKRGVFPGARSRSRAPLPPVARRASACRRGRAHVRAMHARLAKPPSRRRLALSRNRQNRRN
RPPPRPEQRARQRSRTAGPKRLRHGVFSLADTFRRPPCERLRSTAAARKLARRSFSRSILSFQRRFAIMQTATRAAARFA
AYRTTCSPPTGSVQ
>Mature_173_residues
GGCRCVHGRDCNGSRPPFGKRGVFPGARSRSRAPLPPVARRASACRRGRAHVRAMHARLAKPPSRRRLALSRNRQNRRNR
PPPRPEQRARQRSRTAGPKRLRHGVFSLADTFRRPPCERLRSTAAARKLARRSFSRSILSFQRRFAIMQTATRAAARFAA
YRTTCSPPTGSVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19645; Mature: 19514

Theoretical pI: Translated: 12.90; Mature: 12.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGCRCVHGRDCNGSRPPFGKRGVFPGARSRSRAPLPPVARRASACRRGRAHVRAMHARL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKPPSRRRLALSRNRQNRRNRPPPRPEQRARQRSRTAGPKRLRHGVFSLADTFRRPPCER
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH
LRSTAAARKLARRSFSRSILSFQRRFAIMQTATRAAARFAAYRTTCSPPTGSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GGCRCVHGRDCNGSRPPFGKRGVFPGARSRSRAPLPPVARRASACRRGRAHVRAMHARL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKPPSRRRLALSRNRQNRRNRPPPRPEQRARQRSRTAGPKRLRHGVFSLADTFRRPPCER
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH
LRSTAAARKLARRSFSRSILSFQRRFAIMQTATRAAARFAAYRTTCSPPTGSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA