| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is cinA [C]
Identifier: 126452374
GI number: 126452374
Start: 2659513
End: 2660331
Strand: Reverse
Name: cinA [C]
Synonym: BURPS1106A_2693
Alternate gene names: 126452374
Gene position: 2660331-2659513 (Counterclockwise)
Preceding gene: 126455162
Following gene: 126452705
Centisome position: 66.7
GC content: 68.25
Gene sequence:
>819_bases ATGACCATCGGCATCATCATCATCGGCGACGAGATCCTGTCCGGCCGCCGCCAGGACAAGCACCTCGCCAAGGCGATCGA GCTCCTCGCCGCGCGCGGGCTCGCGCTCGGCTGGGCCGAATACGTCGGCGACGATCCCGCGCGGATCACGGCGACGCTCG CGCGCACGTTCGCCTCGGGCGACATCGTGTTCTCGACGGGCGGCATCGGCGCGACGCCCGACGACCACACGCGTCAGTGC GCGGCCGCCGCGCTCGGCGTGCCGCTCGAACTGCATCCGCAGGCGAGAGCGCTGATCGAGGAGCGGATTCGCGAGACGCA CGCCGATCCGGCGAAACCCGTCGATCCCGATTCGCCCGAAAACCGCCATCGGCTGAACATGGGCGTGTTCCCACGCGGCG CGACGATCATCCCGAACGGCTACAACCGGATTCCGGGCTTTTCGTGCGGCGATCATCACTTCGTGCCGGGTTTTCCGGTG ATGGCTTGGCCGATGATCGAATGGGTGCTCGACACGAAGTACGCGCACCTGCACCACGCGAGCCCGCACGCGGAGCGCTC GCTCTATGTGTTCGAACTGCCCGAATCGACGCTGACGCCGCTGATGGAGAAGATCGAGCGGGATTTTCCGGGCGTGCGGG TGTTCAGCCTGCCGAGCGTCGGCGACGCGGAAAAGGGCGGCATCTATGCGCGCCGGCACATCGATCTCGGCGTGAAGGGC GAGCCGGAAGCGGTCGCGGCCGCGTTCGTGAAGCTGCGCGAGGGCGTGCACTTGCTCGGCGGGGACATCGTCGAGCCGGC CGAGCCGCAGCACGGCTGA
Upstream 100 bases:
>100_bases TGTTCTCGGCGCTGTGGTTCGGTTTCTATTGCCTGCGCGCGCTGCAGGACGAGCGCGCGGCCGCCGCGAACGCGATTTCC ACCGATTCGACGAGGCAAGC
Downstream 100 bases:
>100_bases GCGGGCGGTCGCGGCGGGCGCCCGCCGCCTTCACGTCCGCCGTCGTGCCCGCCGTCGTCACGCGCGCAGGCGAACGAGGC GCGCGGCGCTGCCGGCGGCG
Product: molybdopterin binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTIGIIIIGDEILSGRRQDKHLAKAIELLAARGLALGWAEYVGDDPARITATLARTFASGDIVFSTGGIGATPDDHTRQC AAAALGVPLELHPQARALIEERIRETHADPAKPVDPDSPENRHRLNMGVFPRGATIIPNGYNRIPGFSCGDHHFVPGFPV MAWPMIEWVLDTKYAHLHHASPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAEKGGIYARRHIDLGVKG EPEAVAAAFVKLREGVHLLGGDIVEPAEPQHG
Sequences:
>Translated_272_residues MTIGIIIIGDEILSGRRQDKHLAKAIELLAARGLALGWAEYVGDDPARITATLARTFASGDIVFSTGGIGATPDDHTRQC AAAALGVPLELHPQARALIEERIRETHADPAKPVDPDSPENRHRLNMGVFPRGATIIPNGYNRIPGFSCGDHHFVPGFPV MAWPMIEWVLDTKYAHLHHASPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAEKGGIYARRHIDLGVKG EPEAVAAAFVKLREGVHLLGGDIVEPAEPQHG >Mature_271_residues TIGIIIIGDEILSGRRQDKHLAKAIELLAARGLALGWAEYVGDDPARITATLARTFASGDIVFSTGGIGATPDDHTRQCA AAALGVPLELHPQARALIEERIRETHADPAKPVDPDSPENRHRLNMGVFPRGATIIPNGYNRIPGFSCGDHHFVPGFPVM AWPMIEWVLDTKYAHLHHASPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAEKGGIYARRHIDLGVKGE PEAVAAAFVKLREGVHLLGGDIVEPAEPQHG
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323832, Length=172, Percent_Identity=30.8139534883721, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 29548; Mature: 29417
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGIIIIGDEILSGRRQDKHLAKAIELLAARGLALGWAEYVGDDPARITATLARTFASG CEEEEEEECHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCC DIVFSTGGIGATPDDHTRQCAAAALGVPLELHPQARALIEERIRETHADPAKPVDPDSPE CEEEECCCCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCC NRHRLNMGVFPRGATIIPNGYNRIPGFSCGDHHFVPGFPVMAWPMIEWVLDTKYAHLHHA CCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAEKGGIYARRHIDLGVKG CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCC EPEAVAAAFVKLREGVHLLGGDIVEPAEPQHG CHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC >Mature Secondary Structure TIGIIIIGDEILSGRRQDKHLAKAIELLAARGLALGWAEYVGDDPARITATLARTFASG EEEEEEECHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCC DIVFSTGGIGATPDDHTRQCAAAALGVPLELHPQARALIEERIRETHADPAKPVDPDSPE CEEEECCCCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCC NRHRLNMGVFPRGATIIPNGYNRIPGFSCGDHHFVPGFPVMAWPMIEWVLDTKYAHLHHA CCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAEKGGIYARRHIDLGVKG CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCC EPEAVAAAFVKLREGVHLLGGDIVEPAEPQHG CHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA