| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452364
Identifier: 126452364
GI number: 126452364
Start: 917307
End: 918521
Strand: Direct
Name: 126452364
Synonym: BURPS1106A_0935
Alternate gene names: NA
Gene position: 917307-918521 (Clockwise)
Preceding gene: 126453553
Following gene: 126451801
Centisome position: 23.0
GC content: 66.91
Gene sequence:
>1215_bases GTGACGCTGATGACCGCCGCTTGCGGCGGCTCCGACGGCTCGGGCGCGCCCGGCGCCAGCATTTTCAAGTCGCCGCACGG CTCGGGCTCATCGAGTACCACGGGCACGAGCGGCACCACCACGAGCGGCACCGGCGGCACGAGCACCGGCAGCACGCAGA CCACGATGGCGCTGCAGATGGCGGACTTCATCCTCGCTCAGCAGGACAGCAATGGCGCGATTCCGGACGAAGCGGGCAGC GGCACCGCCAATACGGACTCCGATATGGAATACGCGCTGATCGGCCTTGCGGCCGCGTACGGCGCGACGCATGACGCGAA GTACCTGAACGGTCTCGAGAAGGGCATCGCCTGGCTCGCCGCGCGCGAGGAGATGACCGATCCGGCCTGGAGGGGAAGCT GGCGCTATGTGTATTCGATGACGCCGCCGTACGATCCGATCCCGACGTCGCCGGGCGCCGGCATTGCCGACGTGCGCGGC GTGGACGCGACGTCCGCGCTGTTCGTCTACCTGCTCTATCTCGACCGGCAACTGACGGGCAGCAGCGCGCTCGTCACGCA ATACGGCGCCAATGCGCGCGCGGCGCTCGATTTCGTGCTCGCGAAGAACATCAATCCGAGCGGCTACTCGGGCAGCTCGT GGCAACTGCCCGTCGGCAGCACCACGTGGCAGTTCTGGCCGTACGAGTACGCGGCGGATCAGGGCGATGTCTATCTCGGC ATGAACGGGGGCGCGCTGCTGTTTCCGGACAATCCGAACTACGCGGCGAAGGCGGCTTTCCTGAGGAACAACGTGCCGTC GCAGTTCTACATGACGGGCGCGCAGCGTTATTCGGTCGGCCGCGATACGGGAGCGCCGCTCGATTCGGACCTCGGCATCG ATACGATCTTTCCGCAGGGCTATCTGCCGTGGGTGTTCGGCGCGAATTCGCAGAGCATCGGCTCGATCCAGTGGATGATC AACCAGACGGCCGCCGACGGCAGCATCCGTTCGCCGTCGACCGACCCCGCGTACGCGCTGTCCAACGTGATCCTGCTGCT CGGCGCGCCGACCCAGGGCATGCAGGCGCCGTCGACGACACTGCCGTGGATCGTGAACAACGTGCTCGATCCGCAGACGT ACGGCATCCACGACTACCCCGGCTCGCCGGACCAGGAGACGAACGTCTCCGGGTTCGCGGTCGCGGCGTTGCTCGGGACG AAGGCGTTCCCCTGA
Upstream 100 bases:
>100_bases GGGGGCGCGGTACTTTTCTTTGCTTCTGGAAAAGGTAGACGACAACATGGCACTCTCACGAGGCACTCGCACTTTGATCG GTGCAACGCTTTGCGCATCC
Downstream 100 bases:
>100_bases TCGGCGCGTGAGCCCGGCCGGCCGCGCCGGGCGCCGGCCGGCTTGGGGCGCGGCGGCCGGGCGCTCGTGATCGGGGCCTC GCGCGGCCGGCGACGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTLMTAACGGSDGSGAPGASIFKSPHGSGSSSTTGTSGTTTSGTGGTSTGSTQTTMALQMADFILAQQDSNGAIPDEAGS GTANTDSDMEYALIGLAAAYGATHDAKYLNGLEKGIAWLAAREEMTDPAWRGSWRYVYSMTPPYDPIPTSPGAGIADVRG VDATSALFVYLLYLDRQLTGSSALVTQYGANARAALDFVLAKNINPSGYSGSSWQLPVGSTTWQFWPYEYAADQGDVYLG MNGGALLFPDNPNYAAKAAFLRNNVPSQFYMTGAQRYSVGRDTGAPLDSDLGIDTIFPQGYLPWVFGANSQSIGSIQWMI NQTAADGSIRSPSTDPAYALSNVILLLGAPTQGMQAPSTTLPWIVNNVLDPQTYGIHDYPGSPDQETNVSGFAVAALLGT KAFP
Sequences:
>Translated_404_residues MTLMTAACGGSDGSGAPGASIFKSPHGSGSSSTTGTSGTTTSGTGGTSTGSTQTTMALQMADFILAQQDSNGAIPDEAGS GTANTDSDMEYALIGLAAAYGATHDAKYLNGLEKGIAWLAAREEMTDPAWRGSWRYVYSMTPPYDPIPTSPGAGIADVRG VDATSALFVYLLYLDRQLTGSSALVTQYGANARAALDFVLAKNINPSGYSGSSWQLPVGSTTWQFWPYEYAADQGDVYLG MNGGALLFPDNPNYAAKAAFLRNNVPSQFYMTGAQRYSVGRDTGAPLDSDLGIDTIFPQGYLPWVFGANSQSIGSIQWMI NQTAADGSIRSPSTDPAYALSNVILLLGAPTQGMQAPSTTLPWIVNNVLDPQTYGIHDYPGSPDQETNVSGFAVAALLGT KAFP >Mature_403_residues TLMTAACGGSDGSGAPGASIFKSPHGSGSSSTTGTSGTTTSGTGGTSTGSTQTTMALQMADFILAQQDSNGAIPDEAGSG TANTDSDMEYALIGLAAAYGATHDAKYLNGLEKGIAWLAAREEMTDPAWRGSWRYVYSMTPPYDPIPTSPGAGIADVRGV DATSALFVYLLYLDRQLTGSSALVTQYGANARAALDFVLAKNINPSGYSGSSWQLPVGSTTWQFWPYEYAADQGDVYLGM NGGALLFPDNPNYAAKAAFLRNNVPSQFYMTGAQRYSVGRDTGAPLDSDLGIDTIFPQGYLPWVFGANSQSIGSIQWMIN QTAADGSIRSPSTDPAYALSNVILLLGAPTQGMQAPSTTLPWIVNNVLDPQTYGIHDYPGSPDQETNVSGFAVAALLGTK AFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42192; Mature: 42061
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMTAACGGSDGSGAPGASIFKSPHGSGSSSTTGTSGTTTSGTGGTSTGSTQTTMALQM CEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ADFILAQQDSNGAIPDEAGSGTANTDSDMEYALIGLAAAYGATHDAKYLNGLEKGIAWLA HHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AREEMTDPAWRGSWRYVYSMTPPYDPIPTSPGAGIADVRGVDATSALFVYLLYLDRQLTG HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC SSALVTQYGANARAALDFVLAKNINPSGYSGSSWQLPVGSTTWQFWPYEYAADQGDVYLG CCEEEEECCCCCHHHHEEHHHCCCCCCCCCCCEEEECCCCCEEEECCHHHCCCCCCEEEE MNGGALLFPDNPNYAAKAAFLRNNVPSQFYMTGAQRYSVGRDTGAPLDSDLGIDTIFPQG ECCCEEEECCCCCHHHHHHHHHCCCCCCEEECCCHHEECCCCCCCCCCCCCCCEEECCCC YLPWVFGANSQSIGSIQWMINQTAADGSIRSPSTDPAYALSNVILLLGAPTQGMQAPSTT CCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCC LPWIVNNVLDPQTYGIHDYPGSPDQETNVSGFAVAALLGTKAFP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure TLMTAACGGSDGSGAPGASIFKSPHGSGSSSTTGTSGTTTSGTGGTSTGSTQTTMALQM EEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ADFILAQQDSNGAIPDEAGSGTANTDSDMEYALIGLAAAYGATHDAKYLNGLEKGIAWLA HHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AREEMTDPAWRGSWRYVYSMTPPYDPIPTSPGAGIADVRGVDATSALFVYLLYLDRQLTG HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC SSALVTQYGANARAALDFVLAKNINPSGYSGSSWQLPVGSTTWQFWPYEYAADQGDVYLG CCEEEEECCCCCHHHHEEHHHCCCCCCCCCCCEEEECCCCCEEEECCHHHCCCCCCEEEE MNGGALLFPDNPNYAAKAAFLRNNVPSQFYMTGAQRYSVGRDTGAPLDSDLGIDTIFPQG ECCCEEEECCCCCHHHHHHHHHCCCCCCEEECCCHHEECCCCCCCCCCCCCCCEEECCCC YLPWVFGANSQSIGSIQWMINQTAADGSIRSPSTDPAYALSNVILLLGAPTQGMQAPSTT CCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCC LPWIVNNVLDPQTYGIHDYPGSPDQETNVSGFAVAALLGTKAFP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA