Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126452334

Identifier: 126452334

GI number: 126452334

Start: 3096758

End: 3098605

Strand: Reverse

Name: 126452334

Synonym: BURPS1106A_3181

Alternate gene names: NA

Gene position: 3098605-3096758 (Counterclockwise)

Preceding gene: 126451677

Following gene: 126451464

Centisome position: 77.69

GC content: 65.64

Gene sequence:

>1848_bases
ATGAAGATACAGAAGTCCTTGAAAGACGGTTTCACGCTCGGATGGTGCAGGGCGGCACGGCCGGTTGCCGCTGCCGCGCT
GGCCGCGCTGCTCGTCGCCGCGTGCGGCGGCGACGACGGCGGCGGCGGGAGCCCGTCGCTCGCGGCCGCGAACGTCGCGA
ACACGAGCACGCCGACGAACGCGACGACGGCCGCCGATGCGACGACCAATGCCGCGCTGCCGCCGGATCAGCCGTATATC
GACAACGACGTCTATGGCACCGGGCCGAACGATTCGGTCAGCGACGCGACGGAGGGCACCGCGGTCGTGCACCGGCAGGT
GAAGATCGGCGATCAGATCCTCACCTACACGGCGACGGCCGGCCACCTCGTGACGATCGATCCGATCACGTCGAAGCCGA
ACGCGAAGATGTTCTACGTCGCGTACACGCTCGACAATCCGAACCCGGGCAAGCCGCGCCCCGTCACGTTCTTCTACAAC
GGCGGCCCGGGCTCGTCGTCGGTGTACCTGCTGCTGGGCTCGTTCGGGCCGAAGCGCCTGCAGTCGTCGTTCCCGAACTT
CACGCCGCCCGCGCCGTACCGGCTGCGCGACAACCCCGAGAGCCTGCTCGACCGCTCCGATCTCGTGTTCATCAATCCGG
TCGGCACCGGCTACTCGGCCGCGATCGCGCCGGCGAAGAACAAGGATTTCTGGGGCGTCGACCAGGACGCGCACTCGATC
GACCGCTTCATCCAGCGCTACCTGACGAAGTACGCGCGCTGGAACTCGCCGAAGTTCCTGTTCGGCGAATCGTACGGCAC
GGCGCGCAGCGCGGTGACCGCGTGGGTGCTGCATGAGGACGGCATCGAGCTGAACGGGATCACGCTGCAGTCGTCGATTC
TCGACTATGCGAACGCGGTGAGCGCGATCGGCATCTTCCCGACGCTCGCGGCCGATGCGTTCTACTGGAACAAGACGACC
ATCAGCCCGAAACCGGCCGATCTGGACGCATACATGGCGCAGGCGCGCAGCTATGCGGACAACGTGCTCGCGCCGCTCGC
GCAGGCGCCGAATCCGCAGGACGGCGGCTTCGTCAACGTGCGGCTGAACCTGAACGTCGCGACCGCGCAGCAGATGGGCG
CGTACATCGGCACCGATCCGATCTCGCTGGTCCAGACGTTCGGCAATCCGGCCGCGCTCGGCAACGTGCCGTCGTCCAAC
GACAACCCGCCGTACACGTTCTTCCTGACGCTCGTGCCGGGCATCCAGATCGGCCAGTACGACGGACGCGCGAACTACAC
GGGCAAGGGCATCGCGCCGTACATCCTGCCGAACTCGGGCAGCAACGATCCGTCGATCAGCAACGTCGGCGGCGCGTACA
CGGTGCTGTGGAACGACTACATCAACAACGACCTGAAGTATGTGTCGACGTCGTCGTTCGTCGATCTGAACGACCAGGTG
TTCAACAACTGGGACTTCAGCCACACGGACCCGACGGGCGCGAACCGCGGCGGCGGCAACACGCTGTACACGGCGGGCGA
TCTCGCCGCGACGATGAGCCTGAACCCGGACCTGAAGGTGCTGTCGGCGAACGGCTATTTCGACGCGGTGACGCCGTTCC
ACCAGACCGAGCTCACGCTCGCGCAGATGCCGCTCGATCCGTCGCTGAAGTCGGCGAACCTGACGATGAAATACTATCCG
TCGGGCCACATGATCTATCTGAACGATCACTCGCGGATCGCGATGAAGGCGGATCTGGCGACGTTCTACGACGGCATCCT
CGCGGACCGCACGGCGATGCGGCGCGTGCTGCTGCGCCAGCAGAAGGCGCTGCAGTTGAAGCAGCAGAAGCAACAGCAAG
GGCAGTGA

Upstream 100 bases:

>100_bases
GGAGTGCGCGTCGCATAACGGTCGCGTTCCCGGCGAAGCGCGCCGATGAAATCATCCGTTTCAATCGGCGGAATTTATCG
TTCTATTCGAGAGGGCAATA

Downstream 100 bases:

>100_bases
TGCGAGGCTAGCCGTTCCGGCCGTGTCTGCCGGGGCCGGCCGCCGCCGAGCGGCGGTGGATGGCGGGCGGTGCGGTGTGC
TTGAACGGCGGCTTCGCGGC

Product: carboxypeptidase C

Products: NA

Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Acetoin Dehydrogenase E1 Component Beta-Subunit; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MKIQKSLKDGFTLGWCRAARPVAAAALAALLVAACGGDDGGGGSPSLAAANVANTSTPTNATTAADATTNAALPPDQPYI
DNDVYGTGPNDSVSDATEGTAVVHRQVKIGDQILTYTATAGHLVTIDPITSKPNAKMFYVAYTLDNPNPGKPRPVTFFYN
GGPGSSSVYLLLGSFGPKRLQSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSI
DRFIQRYLTKYARWNSPKFLFGESYGTARSAVTAWVLHEDGIELNGITLQSSILDYANAVSAIGIFPTLAADAFYWNKTT
ISPKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRLNLNVATAQQMGAYIGTDPISLVQTFGNPAALGNVPSSN
DNPPYTFFLTLVPGIQIGQYDGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQV
FNNWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPSLKSANLTMKYYP
SGHMIYLNDHSRIAMKADLATFYDGILADRTAMRRVLLRQQKALQLKQQKQQQGQ

Sequences:

>Translated_615_residues
MKIQKSLKDGFTLGWCRAARPVAAAALAALLVAACGGDDGGGGSPSLAAANVANTSTPTNATTAADATTNAALPPDQPYI
DNDVYGTGPNDSVSDATEGTAVVHRQVKIGDQILTYTATAGHLVTIDPITSKPNAKMFYVAYTLDNPNPGKPRPVTFFYN
GGPGSSSVYLLLGSFGPKRLQSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSI
DRFIQRYLTKYARWNSPKFLFGESYGTARSAVTAWVLHEDGIELNGITLQSSILDYANAVSAIGIFPTLAADAFYWNKTT
ISPKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRLNLNVATAQQMGAYIGTDPISLVQTFGNPAALGNVPSSN
DNPPYTFFLTLVPGIQIGQYDGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQV
FNNWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPSLKSANLTMKYYP
SGHMIYLNDHSRIAMKADLATFYDGILADRTAMRRVLLRQQKALQLKQQKQQQGQ
>Mature_615_residues
MKIQKSLKDGFTLGWCRAARPVAAAALAALLVAACGGDDGGGGSPSLAAANVANTSTPTNATTAADATTNAALPPDQPYI
DNDVYGTGPNDSVSDATEGTAVVHRQVKIGDQILTYTATAGHLVTIDPITSKPNAKMFYVAYTLDNPNPGKPRPVTFFYN
GGPGSSSVYLLLGSFGPKRLQSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSI
DRFIQRYLTKYARWNSPKFLFGESYGTARSAVTAWVLHEDGIELNGITLQSSILDYANAVSAIGIFPTLAADAFYWNKTT
ISPKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRLNLNVATAQQMGAYIGTDPISLVQTFGNPAALGNVPSSN
DNPPYTFFLTLVPGIQIGQYDGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQV
FNNWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPSLKSANLTMKYYP
SGHMIYLNDHSRIAMKADLATFYDGILADRTAMRRVLLRQQKALQLKQQKQQQGQ

Specific function: Unknown

COG id: COG2939

COG function: function code E; Carboxypeptidase C (cathepsin A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66027; Mature: 66027

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQKSLKDGFTLGWCRAARPVAAAALAALLVAACGGDDGGGGSPSLAAANVANTSTPTN
CCCHHHHHCCCEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC
ATTAADATTNAALPPDQPYIDNDVYGTGPNDSVSDATEGTAVVHRQVKIGDQILTYTATA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECC
GHLVTIDPITSKPNAKMFYVAYTLDNPNPGKPRPVTFFYNGGPGSSSVYLLLGSFGPKRL
CEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHH
QSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSI
HHCCCCCCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHH
DRFIQRYLTKYARWNSPKFLFGESYGTARSAVTAWVLHEDGIELNGITLQSSILDYANAV
HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHEEEEEEECCCCEEEEEEEHHHHHHHHHHH
SAIGIFPTLAADAFYWNKTTISPKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNV
HHHHHHHHHHHCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
RLNLNVATAQQMGAYIGTDPISLVQTFGNPAALGNVPSSNDNPPYTFFLTLVPGIQIGQY
EEEEEEEEHHHCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCEEEECC
DGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQV
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEECCCEEECCHHH
FNNWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTL
HCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEE
AQMPLDPSLKSANLTMKYYPSGHMIYLNDHSRIAMKADLATFYDGILADRTAMRRVLLRQ
EECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
QKALQLKQQKQQQGQ
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIQKSLKDGFTLGWCRAARPVAAAALAALLVAACGGDDGGGGSPSLAAANVANTSTPTN
CCCHHHHHCCCEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC
ATTAADATTNAALPPDQPYIDNDVYGTGPNDSVSDATEGTAVVHRQVKIGDQILTYTATA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECC
GHLVTIDPITSKPNAKMFYVAYTLDNPNPGKPRPVTFFYNGGPGSSSVYLLLGSFGPKRL
CEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHH
QSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSI
HHCCCCCCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHH
DRFIQRYLTKYARWNSPKFLFGESYGTARSAVTAWVLHEDGIELNGITLQSSILDYANAV
HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHEEEEEEECCCCEEEEEEEHHHHHHHHHHH
SAIGIFPTLAADAFYWNKTTISPKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNV
HHHHHHHHHHHCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
RLNLNVATAQQMGAYIGTDPISLVQTFGNPAALGNVPSSNDNPPYTFFLTLVPGIQIGQY
EEEEEEEEHHHCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCEEEECC
DGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQV
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEECCCEEECCHHH
FNNWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTL
HCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEE
AQMPLDPSLKSANLTMKYYPSGHMIYLNDHSRIAMKADLATFYDGILADRTAMRRVLLRQ
EECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
QKALQLKQQKQQQGQ
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA