| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452333
Identifier: 126452333
GI number: 126452333
Start: 75535
End: 76503
Strand: Direct
Name: 126452333
Synonym: BURPS1106A_0079
Alternate gene names: NA
Gene position: 75535-76503 (Clockwise)
Preceding gene: 126451519
Following gene: 126453223
Centisome position: 1.89
GC content: 67.49
Gene sequence:
>969_bases ATGCGGATGTGCGGTCGGCCCGCCTACGTCGCGCCGCCCGGCGTGATCGATTGGCGCGGGCGCGCGATGCCTCGCGTTTG CGAACGCGCCGGCGCTCAACGGGTAAACGAACGAGCGCGCGGCGGTATTCCGTGCGCGATATTCCGCGTGCGCTCTTGCA TGCGCGACAGCGGCGAGCAGGAACGCGCGGCGCACGCGATGAGCGACCGGCGCGCCGGGCAAGGCGCGGCTGCGCAAACG GCATGCGCGTCGCGCGCCTTCGGTGTTTTTCGTGTTCGTGTCCGCGATCGGCTTGTGTCCGCGTACATTGAGCGCGGATG CCGTTGCCGTCGCGCATCGCGGCGGCCGTGCGCGGCGCGCATGCATACGCCGGCACGGCCGATGCGCGCGCGACGCGCAA ACTGCACGCGGCGCGGGATTTGTGTTGAATTGTCGCGGCGGTTGATCGTTTCGCGCATCTGCCCGACAATCCGGTTCGCT TGGCTGGTTGCGGCAATTCGAATTCCGCTTATAAAAACCGAGGGAACCATGCCTTACGTGTCGACCCATTACTCGAACAA CGCCAGCGCGCCGGTCGGCCGCTGGACCTGCGCGCCGACTTCGAAGCTCGCGCCTTTCGACAAGGCGCCGACGGGCAGCG TCACGTCCGGCGTCGATCTGTGCGGCCAATGCGTGTCCTACGTGAAACGGGTCTGCCCGACGCTGCCGCTCACCGGGCAA TGGCGCAAGGGCGCGCCGGTGAAAGGCAACGCGACGATCGTCGCGGGCACCGTGATCGCGACGTTCAACGCCGCCGGCAA GTACGACGGCCACGCGGCGATCTACGTCAGCCAGACGAAGGACGGCGGCATCCTGGTGTACGACCAGTTCGTGACGCCGC CGACGCCGCAGCCGGTTCGGCAACGGCGCCTGCGCTGGGGCGCGCATGGTCGGTCGAACAATGGGGATAACTTCTATGTC GTGGAGTAA
Upstream 100 bases:
>100_bases TTTGCGCGCACGCGCAGACGAATGCGCCTGAGCCGATCAGCGCGGTGGTGCAACGGAGGATCAACCTGTTCATGATGAGG CTCTGAGCGGACACCCTGAC
Downstream 100 bases:
>100_bases GGCCGCCTGCGCGCTGTTCGCCCTGTCGTTCCTCGGATGCGCGGGCGCGTCCGGCACGGCGGGCTCGATCGACGCCGGCA CGCAAGTGTGCCCGGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRMCGRPAYVAPPGVIDWRGRAMPRVCERAGAQRVNERARGGIPCAIFRVRSCMRDSGEQERAAHAMSDRRAGQGAAAQT ACASRAFGVFRVRVRDRLVSAYIERGCRCRRASRRPCAARMHTPARPMRARRANCTRRGICVELSRRLIVSRICPTIRFA WLVAAIRIPLIKTEGTMPYVSTHYSNNASAPVGRWTCAPTSKLAPFDKAPTGSVTSGVDLCGQCVSYVKRVCPTLPLTGQ WRKGAPVKGNATIVAGTVIATFNAAGKYDGHAAIYVSQTKDGGILVYDQFVTPPTPQPVRQRRLRWGAHGRSNNGDNFYV VE
Sequences:
>Translated_322_residues MRMCGRPAYVAPPGVIDWRGRAMPRVCERAGAQRVNERARGGIPCAIFRVRSCMRDSGEQERAAHAMSDRRAGQGAAAQT ACASRAFGVFRVRVRDRLVSAYIERGCRCRRASRRPCAARMHTPARPMRARRANCTRRGICVELSRRLIVSRICPTIRFA WLVAAIRIPLIKTEGTMPYVSTHYSNNASAPVGRWTCAPTSKLAPFDKAPTGSVTSGVDLCGQCVSYVKRVCPTLPLTGQ WRKGAPVKGNATIVAGTVIATFNAAGKYDGHAAIYVSQTKDGGILVYDQFVTPPTPQPVRQRRLRWGAHGRSNNGDNFYV VE >Mature_322_residues MRMCGRPAYVAPPGVIDWRGRAMPRVCERAGAQRVNERARGGIPCAIFRVRSCMRDSGEQERAAHAMSDRRAGQGAAAQT ACASRAFGVFRVRVRDRLVSAYIERGCRCRRASRRPCAARMHTPARPMRARRANCTRRGICVELSRRLIVSRICPTIRFA WLVAAIRIPLIKTEGTMPYVSTHYSNNASAPVGRWTCAPTSKLAPFDKAPTGSVTSGVDLCGQCVSYVKRVCPTLPLTGQ WRKGAPVKGNATIVAGTVIATFNAAGKYDGHAAIYVSQTKDGGILVYDQFVTPPTPQPVRQRRLRWGAHGRSNNGDNFYV VE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35347; Mature: 35347
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMCGRPAYVAPPGVIDWRGRAMPRVCERAGAQRVNERARGGIPCAIFRVRSCMRDSGEQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH ERAAHAMSDRRAGQGAAAQTACASRAFGVFRVRVRDRLVSAYIERGCRCRRASRRPCAAR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MHTPARPMRARRANCTRRGICVELSRRLIVSRICPTIRFAWLVAAIRIPLIKTEGTMPYV CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEE STHYSNNASAPVGRWTCAPTSKLAPFDKAPTGSVTSGVDLCGQCVSYVKRVCPTLPLTGQ EEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC WRKGAPVKGNATIVAGTVIATFNAAGKYDGHAAIYVSQTKDGGILVYDQFVTPPTPQPVR CCCCCCCCCCCEEEEEHEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHHH QRRLRWGAHGRSNNGDNFYVVE HHHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure MRMCGRPAYVAPPGVIDWRGRAMPRVCERAGAQRVNERARGGIPCAIFRVRSCMRDSGEQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH ERAAHAMSDRRAGQGAAAQTACASRAFGVFRVRVRDRLVSAYIERGCRCRRASRRPCAAR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MHTPARPMRARRANCTRRGICVELSRRLIVSRICPTIRFAWLVAAIRIPLIKTEGTMPYV CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEE STHYSNNASAPVGRWTCAPTSKLAPFDKAPTGSVTSGVDLCGQCVSYVKRVCPTLPLTGQ EEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC WRKGAPVKGNATIVAGTVIATFNAAGKYDGHAAIYVSQTKDGGILVYDQFVTPPTPQPVR CCCCCCCCCCCEEEEEHEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHHH QRRLRWGAHGRSNNGDNFYVVE HHHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA