| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yceG [C]
Identifier: 126452309
GI number: 126452309
Start: 2296964
End: 2297983
Strand: Reverse
Name: yceG [C]
Synonym: BURPS1106A_2321
Alternate gene names: 126452309
Gene position: 2297983-2296964 (Counterclockwise)
Preceding gene: 126452096
Following gene: 126454444
Centisome position: 57.62
GC content: 69.12
Gene sequence:
>1020_bases ATGTCCCTACTGAAGAAGTGCGCCGCGCTCGCGGCGCTCGCCGTCGTATTGCTGGGCGTCGCGTGCGCGGGCGGCGCCTA TTACTGGGCCACTCGGCCGCTCGCGCTCGCCGCGCCGATCCTAGATGTGACGATCAAGCCCCGCAGCAGCGTGCGCAGCG TCGCGCAGCAACTCGTGCACGGCGGCGTGGGCGTCGAGCCGCGCCTGTTCGTCGCGATGACGCGCGTGCTGTTCCTGTCG AGCCGGCTCAAGTCCGGCAATTACGAATTCAAGACGGGCGTGAGCCCTTACGAGGTGCTGCAGAAGGTCGCGCGCGGGGA CGTGAACGAATATGTCGTGACCGTGATCGAGGGCTGGACGTTCCGGCGCATGCGCGCGGAGCTCGACGCGAATGCGGCGC TCGCGCATGCGAGCGCGGGGATGAGCGACGCGGCGCTGCTGCGCGCGATCGGCGCGCCCGCCGAAGTCGTCGCGCGCGGC ACCGGCGAGGGGCTGTTCTTTCCGGATACCTACCTGTTCGACAAGGGCACGAGCGACCTGAACGTGTACCGGCGCGCGTA TCGGCTGATGCAGGCGCGCCTGGCCGACGCGTGGACCGCCCGTCGGCCCGGCCTGCCGTTCAAGACCCCTTACGAGGCGC TGACGGTCGCGTCGCTCGTCGAGAAGGAGACGGGGCACGCGTCCGACCGTGCGTTCGTGTCGGGCGTGTTCGCGAATCGC CTGCGGGCCGGGATGCCGCTGCAGACCGATCCCTCGGTGATCTACGGAATGGGCGACGCGTACACGGGGCGGCTGCGCAA GCGCGATCTGCAGACCGACACTCCGTACAATACCTACACGCGCCGCGGGCTGCCCCCGACGCCGATCGCGCTGCCGGGCG AGGCGGCGCTCTACGCCGCGGTGAACCCGGCGGCGACGTCCGCGCTCTATTTCGTCGCGAGGGGCGACGGCACGAGCGTT TTCTCGGACACGCTCGGGGATCACAACAAGGCCGTGGACAAATACATACGAGGTCAATGA
Upstream 100 bases:
>100_bases GGGAGGCGATCGGTGTGCTCATGGAATGAGGGAACAGTCAATCCTGACTTTGGCAGAGGCGAGCAAGTATTATATGGGTC TTACCTGATTCACGTTCCGC
Downstream 100 bases:
>100_bases ATGGCGCGTGGCAAATTCATCACGTTCGAAGGGATCGACGGCGCGGGCAAGACCACGCATCTGCAGTGGTTCTGCGACCG GCTCCAGGAAAGGCTCGGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLLKKCAALAALAVVLLGVACAGGAYYWATRPLALAAPILDVTIKPRSSVRSVAQQLVHGGVGVEPRLFVAMTRVLFLS SRLKSGNYEFKTGVSPYEVLQKVARGDVNEYVVTVIEGWTFRRMRAELDANAALAHASAGMSDAALLRAIGAPAEVVARG TGEGLFFPDTYLFDKGTSDLNVYRRAYRLMQARLADAWTARRPGLPFKTPYEALTVASLVEKETGHASDRAFVSGVFANR LRAGMPLQTDPSVIYGMGDAYTGRLRKRDLQTDTPYNTYTRRGLPPTPIALPGEAALYAAVNPAATSALYFVARGDGTSV FSDTLGDHNKAVDKYIRGQ
Sequences:
>Translated_339_residues MSLLKKCAALAALAVVLLGVACAGGAYYWATRPLALAAPILDVTIKPRSSVRSVAQQLVHGGVGVEPRLFVAMTRVLFLS SRLKSGNYEFKTGVSPYEVLQKVARGDVNEYVVTVIEGWTFRRMRAELDANAALAHASAGMSDAALLRAIGAPAEVVARG TGEGLFFPDTYLFDKGTSDLNVYRRAYRLMQARLADAWTARRPGLPFKTPYEALTVASLVEKETGHASDRAFVSGVFANR LRAGMPLQTDPSVIYGMGDAYTGRLRKRDLQTDTPYNTYTRRGLPPTPIALPGEAALYAAVNPAATSALYFVARGDGTSV FSDTLGDHNKAVDKYIRGQ >Mature_338_residues SLLKKCAALAALAVVLLGVACAGGAYYWATRPLALAAPILDVTIKPRSSVRSVAQQLVHGGVGVEPRLFVAMTRVLFLSS RLKSGNYEFKTGVSPYEVLQKVARGDVNEYVVTVIEGWTFRRMRAELDANAALAHASAGMSDAALLRAIGAPAEVVARGT GEGLFFPDTYLFDKGTSDLNVYRRAYRLMQARLADAWTARRPGLPFKTPYEALTVASLVEKETGHASDRAFVSGVFANRL RAGMPLQTDPSVIYGMGDAYTGRLRKRDLQTDTPYNTYTRRGLPPTPIALPGEAALYAAVNPAATSALYFVARGDGTSVF SDTLGDHNKAVDKYIRGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=338, Percent_Identity=36.6863905325444, Blast_Score=206, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36543; Mature: 36412
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLKKCAALAALAVVLLGVACAGGAYYWATRPLALAAPILDVTIKPRSSVRSVAQQLVH CHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHEEEECCHHHHHHHHHHHHH GGVGVEPRLFVAMTRVLFLSSRLKSGNYEFKTGVSPYEVLQKVARGDVNEYVVTVIEGWT CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCH FRRMRAELDANAALAHASAGMSDAALLRAIGAPAEVVARGTGEGLFFPDTYLFDKGTSDL HHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCHH NVYRRAYRLMQARLADAWTARRPGLPFKTPYEALTVASLVEKETGHASDRAFVSGVFANR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LRAGMPLQTDPSVIYGMGDAYTGRLRKRDLQTDTPYNTYTRRGLPPTPIALPGEAALYAA HHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEECCCCCEEEEE VNPAATSALYFVARGDGTSVFSDTLGDHNKAVDKYIRGQ CCCHHCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure SLLKKCAALAALAVVLLGVACAGGAYYWATRPLALAAPILDVTIKPRSSVRSVAQQLVH HHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHEEEECCHHHHHHHHHHHHH GGVGVEPRLFVAMTRVLFLSSRLKSGNYEFKTGVSPYEVLQKVARGDVNEYVVTVIEGWT CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCH FRRMRAELDANAALAHASAGMSDAALLRAIGAPAEVVARGTGEGLFFPDTYLFDKGTSDL HHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCHH NVYRRAYRLMQARLADAWTARRPGLPFKTPYEALTVASLVEKETGHASDRAFVSGVFANR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LRAGMPLQTDPSVIYGMGDAYTGRLRKRDLQTDTPYNTYTRRGLPPTPIALPGEAALYAA HHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEECCCCCEEEEE VNPAATSALYFVARGDGTSVFSDTLGDHNKAVDKYIRGQ CCCHHCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]