| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452304
Identifier: 126452304
GI number: 126452304
Start: 2412881
End: 2413534
Strand: Reverse
Name: 126452304
Synonym: BURPS1106A_2456
Alternate gene names: NA
Gene position: 2413534-2412881 (Counterclockwise)
Preceding gene: 126453878
Following gene: 126451686
Centisome position: 60.51
GC content: 75.23
Gene sequence:
>654_bases ATGAAACCGTTGCTGCGCGCCGTTCTTCTGATCGATGCCGTGCTGCTCGCCGCGTTCGGCGTGCTGTTCGTGCTGACCCC GTGGAAAGCGCTGTACGACGCGCTGCAACTCGTCACCGTCGATCCCGCGATGGTCGGCCAGGCGTTCGGCATCGCGCTCC TCGGGCTGGCGTGGCTGTCCGTGCACGCCGCGTTCAACGGCGATCTGACCGCGGGCGTCGCGCGCGCGGTCGGGCACGTG AACTGGCTGACGGGCGTCGTGATGCTCGTGTGGCTGCTCGCGGTCCGCTCGCCGCAGTTGTCGTCGTTCGGCCAATTTGT ATCGGTCGTCGCGGGGGCCGTGCTGCTCGTGATCGGTTTCGGCGGCGTGCGGCTCGCGGCCGCGGTGCGGCGGCGCGAGA AGGCGCAGGCGGCCGACACGCGCGGCGCGTCGAAGCGCGCTGCGCAGCCGGTCATGGAGCCCCCCGCGGCCGCGCGGATC GAGCCGGGCGTGTCGCGCGTGAGCACCGCGCCGGGCGCACCCGCCGCCGCGTCGGCCGCGAGCGCCGCGCCGGCCGCCGT GAACGCGGGCACCGCGGCGGCGACGCCTGCCGCGCGCGAGGACGCCGCGCCGAGCGCGCTCGGCGACGCGGCGCGACCGC CGTCGCAACCGTGA
Upstream 100 bases:
>100_bases CGAGTTCGTTCAGATCACCGCAGCCGGCATGCGCGAGTCGCACGTGCACGACGTGCAGATCACGAAGGAAGCCCCCAACT ATCACGTGGACTGATCGCCG
Downstream 100 bases:
>100_bases TCGGCGCGGTTTTCCGGCCCGTCAGGCCGCCGCGCTTCGCGGCGGCGCGATCGCCCCGATACATATTCGATGCAGCGCCG CGTGCGCTGCTTTTGTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLSVHAAFNGDLTAGVARAVGHV NWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGFGGVRLAAAVRRREKAQAADTRGASKRAAQPVMEPPAAARI EPGVSRVSTAPGAPAAASAASAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP
Sequences:
>Translated_217_residues MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLSVHAAFNGDLTAGVARAVGHV NWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGFGGVRLAAAVRRREKAQAADTRGASKRAAQPVMEPPAAARI EPGVSRVSTAPGAPAAASAASAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP >Mature_217_residues MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLSVHAAFNGDLTAGVARAVGHV NWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGFGGVRLAAAVRRREKAQAADTRGASKRAAQPVMEPPAAARI EPGVSRVSTAPGAPAAASAASAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21850; Mature: 21850
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLS CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VHAAFNGDLTAGVARAVGHVNWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGVRLAAAVRRREKAQAADTRGASKRAAQPVMEPPAAARIEPGVSRVSTAPGAPAAASAA CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHH SAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP HCCCCHHCCCCCCCCCCHHHCCCCHHHCCCCCCCCCC >Mature Secondary Structure MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLS CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VHAAFNGDLTAGVARAVGHVNWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGVRLAAAVRRREKAQAADTRGASKRAAQPVMEPPAAARIEPGVSRVSTAPGAPAAASAA CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHH SAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP HCCCCHHCCCCCCCCCCHHHCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA