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The map label for this gene is ydeK [H]

Identifier: 126452292

GI number: 126452292

Start: 1144174

End: 1145082

Strand: Reverse

Name: ydeK [H]

Synonym: BURPS1106A_1164

Alternate gene names: 126452292

Gene position: 1145082-1144174 (Counterclockwise)

Preceding gene: 126453174

Following gene: 126455457

Centisome position: 28.71

GC content: 73.49

Gene sequence:

>909_bases
ATGGATTCGCGCGAAACCCGCGGCATGCTGCTCGGCCTGATCGGCGTGGTGATCTTCAGTCTCACGCTGCCGATGACGCG
CGTCGTCGTCACCGAGCTCCACCCGCTGCTCAACGGCCTCGGGCGCGCGCTCGCCGCGTCGGTGCCGGCCGGGCTGCTGC
TGTGGCTGCGCCGCGAGCGGCTGCCGACCCGCGCGCAGCTGAAGAGCCTCGCCGTCGTGTCGGCGGGCGTGATCGTCGCG
TTTCCGGTGTTCTCCGCCTGGGCGATGAAGACCGTGCCCGCCGCGCACGGCGCGGTCGTCAACGGCCTGCAGCCGCTCCT
CGTCGCGCTGTACGCGGCGTGGCTCGCGCGCGAGCGGCCGTCGAGGGCGTTCTGGGCGAGCGCCGTGCTCGGCAGCGCGC
TCGTGATCGCGTTCGCGCTGCGCGACGGCGGCGGCGCGCTGCAGCCGGGCGACCTGCTGATGCTCGTCGCGGTCGGCATC
GGCGCGCTCGGCTATGCGCAAGGCGCGCGCCTCGCGCGCGAGATCGGCGGCTGGCAGGTGATCTGCTGGGCGCTCGTCGT
GTCCGCGCCGTTTCTCGTGCTGCCCGTCGGCTGGCTCGCGTGGGCGCATCACGCCGCGCACCCCGGTCCCGTGTCGCCCC
GCGTGTGGCTCGCGTTCGGCTACGTGACGCTGTTCTCGCAGTTCATCGGCTTTTTCGCGTGGTACGCGGGCCTCGCGGTC
GGCGGCATCGCGCGCGTCGGCCAGGTGCAGTTGCTGCAGATCTTCTTCACGATCGCGTTCTCGGCGCTGTTTTTCGGCGA
AACGGTCGCGCCGTCGACGTGGCTGTTCGCCGCCGCCGTGATCGCGACCGTCGTGCTCGGCCGCCGCGCCGCCGTGGGCG
CCGCGCCGCATCCGGCTCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
GCGCTAGCGCGGCGATCCGGCCCCGTTCCGGCTCGCGGCTCCGGCTCGACCGCTCCGAAGCGGGCCCGGCCGGCAACCCG
ATATCGATGGAGAAATTTCA

Downstream 100 bases:

>100_bases
TTTGACGAGCGATAATCGACGCTTTCATCCGCACGCCCCATGACACCGACCGAGGAGACCATGAATCCGAGCGATCTCAA
GCCGCCCCGCTGGGCCCTGT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MDSRETRGMLLGLIGVVIFSLTLPMTRVVVTELHPLLNGLGRALAASVPAGLLLWLRRERLPTRAQLKSLAVVSAGVIVA
FPVFSAWAMKTVPAAHGAVVNGLQPLLVALYAAWLARERPSRAFWASAVLGSALVIAFALRDGGGALQPGDLLMLVAVGI
GALGYAQGARLAREIGGWQVICWALVVSAPFLVLPVGWLAWAHHAAHPGPVSPRVWLAFGYVTLFSQFIGFFAWYAGLAV
GGIARVGQVQLLQIFFTIAFSALFFGETVAPSTWLFAAAVIATVVLGRRAAVGAAPHPARAA

Sequences:

>Translated_302_residues
MDSRETRGMLLGLIGVVIFSLTLPMTRVVVTELHPLLNGLGRALAASVPAGLLLWLRRERLPTRAQLKSLAVVSAGVIVA
FPVFSAWAMKTVPAAHGAVVNGLQPLLVALYAAWLARERPSRAFWASAVLGSALVIAFALRDGGGALQPGDLLMLVAVGI
GALGYAQGARLAREIGGWQVICWALVVSAPFLVLPVGWLAWAHHAAHPGPVSPRVWLAFGYVTLFSQFIGFFAWYAGLAV
GGIARVGQVQLLQIFFTIAFSALFFGETVAPSTWLFAAAVIATVVLGRRAAVGAAPHPARAA
>Mature_302_residues
MDSRETRGMLLGLIGVVIFSLTLPMTRVVVTELHPLLNGLGRALAASVPAGLLLWLRRERLPTRAQLKSLAVVSAGVIVA
FPVFSAWAMKTVPAAHGAVVNGLQPLLVALYAAWLARERPSRAFWASAVLGSALVIAFALRDGGGALQPGDLLMLVAVGI
GALGYAQGARLAREIGGWQVICWALVVSAPFLVLPVGWLAWAHHAAHPGPVSPRVWLAFGYVTLFSQFIGFFAWYAGLAV
GGIARVGQVQLLQIFFTIAFSALFFGETVAPSTWLFAAAVIATVVLGRRAAVGAAPHPARAA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31811; Mature: 31811

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRETRGMLLGLIGVVIFSLTLPMTRVVVTELHPLLNGLGRALAASVPAGLLLWLRRER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPTRAQLKSLAVVSAGVIVAFPVFSAWAMKTVPAAHGAVVNGLQPLLVALYAAWLARERP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SRAFWASAVLGSALVIAFALRDGGGALQPGDLLMLVAVGIGALGYAQGARLAREIGGWQV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ICWALVVSAPFLVLPVGWLAWAHHAAHPGPVSPRVWLAFGYVTLFSQFIGFFAWYAGLAV
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIARVGQVQLLQIFFTIAFSALFFGETVAPSTWLFAAAVIATVVLGRRAAVGAAPHPAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AA
CC
>Mature Secondary Structure
MDSRETRGMLLGLIGVVIFSLTLPMTRVVVTELHPLLNGLGRALAASVPAGLLLWLRRER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPTRAQLKSLAVVSAGVIVAFPVFSAWAMKTVPAAHGAVVNGLQPLLVALYAAWLARERP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SRAFWASAVLGSALVIAFALRDGGGALQPGDLLMLVAVGIGALGYAQGARLAREIGGWQV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ICWALVVSAPFLVLPVGWLAWAHHAAHPGPVSPRVWLAFGYVTLFSQFIGFFAWYAGLAV
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIARVGQVQLLQIFFTIAFSALFFGETVAPSTWLFAAAVIATVVLGRRAAVGAAPHPAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]