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The map label for this gene is yccA [H]

Identifier: 126452257

GI number: 126452257

Start: 2221270

End: 2221968

Strand: Direct

Name: yccA [H]

Synonym: BURPS1106A_2232

Alternate gene names: 126452257

Gene position: 2221270-2221968 (Clockwise)

Preceding gene: 126454937

Following gene: 126454152

Centisome position: 55.69

GC content: 63.95

Gene sequence:

>699_bases
ATGAACGACTATCCGTACAACTTCGGCCGCGGCGGCGCGATCGGCACGGCCGAGACCCGCAACCGCGTGCTGCGCAACAC
CTACTGGCTCCTCGCGCTGTCGATGGTGCCGACCGTGCTCGGCGCCTGGGTCGGCGTCGCGACGGGTTTCTCGCTGTTCG
CCGCGACGAGCCCGATGATGAGCCTCCTCGCGTTCTTCGCGATCGCGTTCGGCTTCATGTTCGCGATCGAGCGCACGAAG
AACAGCTCGGCCGGCGTGTTCGTGCTGCTCGGCTTCACGTTCTTCATGGGCCTGATGCTGTCGCGCCTCTTGAGCTTCAT
CCTCGGCTTCTCGAACGGCCCGTCGCTCATCATGCTCGCATTCGGCGGCACCGGCGTGATCTTCGCCGCGATGGCGACGG
TCGCGACCGTCAGCAAGCGCGACTTCTCGGGCCTTGGCAAATGGCTCTTCGTCGGCGTGATCGTGCTGCTGCTCGCGATG
GTCGCGAACATGTTCCTGCAACTGCCGGCGCTGATGCTGACCGTGTCGGTGCTCGCGATCGTGATCTTCTCGGCGTACAT
GCTGTTTGACGTCCAGCGCGTCGTGAACGGCGGCGAGACGAATTACATCAGCGCGACGCTCGCGATCTACCTCGATCTGT
ACAACGTGTTCACGAACCTGCTCGCGCTGCTCGGCATCTTCGGCGGCAACCGCAACTGA

Upstream 100 bases:

>100_bases
GTCGAAACCTATCTTAGGGGTAGCGGCCACACGGTTTTTTGCGACGCAACACGCGCGTCGCCCGCCGGCGGCGCCGCCAC
GTTCCATGTTAGGAGAAACC

Downstream 100 bases:

>100_bases
AGGCCGGCGCCCCCTGCCCCAAAACCGGCCTTCGGGCCGGTTTTTTTCATGCACGCGCCACCCGGCTCCCGCGTCAATCG
CGCTCGAACAGCGCGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTK
NSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIVLLLAM
VANMFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN

Sequences:

>Translated_232_residues
MNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTK
NSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIVLLLAM
VANMFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
>Mature_232_residues
MNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTK
NSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIVLLLAM
VANMFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=207, Percent_Identity=37.6811594202899, Blast_Score=130, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25042; Mature: 25042

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMM
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLAFFAIAFGFMFAIERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
FGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIVLLLAMVANMFLQLPALMLTVSVLAI
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDYPYNFGRGGAIGTAETRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMM
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLAFFAIAFGFMFAIERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
FGGTGVIFAAMATVATVSKRDFSGLGKWLFVGVIVLLLAMVANMFLQLPALMLTVSVLAI
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]