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The map label for this gene is yrbE [C]

Identifier: 126452246

GI number: 126452246

Start: 415881

End: 417005

Strand: Direct

Name: yrbE [C]

Synonym: BURPS1106A_0450

Alternate gene names: 126452246

Gene position: 415881-417005 (Clockwise)

Preceding gene: 126453203

Following gene: 126451832

Centisome position: 10.43

GC content: 70.04

Gene sequence:

>1125_bases
TTGAACTTCCAGACTCCCCCCGGCCTGTCGATCGACGCCGGCAGCCAAGGCCGCACCGTGCGCCTGTGCGGCCAGTGGAC
GGCGCTCGCGCTCGCGCGCGACCGCGGCAACGTCGCGCGCCGGATCGCCCGGCTCGCGAAGGAGGCGGTCGGCGAGTGGG
ACCTGTCGGGCGTCGAGCGGCTCGACCACGTCGGCGGGCAGGCGCTCTGGCGCGTGTGGGGCCGCAGGCTGCCCGACGGG
ATCGCGCTCACCGACAACCAGCGGGTGGTGTTCGAGCGCATCGAGCGGCTCGACGCGGGCCGCGAGTCGCCCGAGCCCGT
CGTGCGGATCGATCCCGTCACGCGCTTCGGCCAGGGTCTCTTCACGTTCGGCGAGCACCTGTACGGCGGCATCGCGCTGC
TCGGCGGCCTGATCGTCGACCTGCTGGCGGTGCTGCGCCGGCCGCGCACGATGCCGTGGACCGAAATCTCCGCGAACGTC
TACGCGGCCGGCACGAAGGCGCTGCCGATCACGGCGCTCGTCGCGTTCCTGATCGGCATCGTGCTGTCGTATCTGTCCGC
GCAGCAGTTGCAGCTGTTCGGCGCGAACCGCTACATCGTCAACATCCTCGGCCTGTCCGTGATCCGCGAGCTCGGGCCGG
TGCTGTCGGCGATCCTCGTCGCGGGCCGCTCGGGCTCCGCGATCACCGCGCAGATCGGCGTGATGCGCGTGACCGAGGAG
CTCGACGCGATGCGCGTGATGGGCATTCCGCACGGCCTGCGCATCACGCTGCCGCGCGTGCTCGCGCTCGGCGTCGCGAT
GCCGCTCCTCGTGATGTGGACCAACGTGATCGCGCTCACGGGCGGCGCGCTCGCCGCGAAGTTCGTGCTCGGCATCGATC
TGAACTTCTTCGTGCGCTCGCTGCCGTCGGTCGTGCCGATCGCGAACCTGTTCATCGGGCTCGGCAAGGGCGTCGTGTTC
GGGATGCTGATCGCGCTCGTCGCGTGCCATTTCGGCTTCCGGATCAAGGCGAACTCGCAGAGCCTCGGCGAAGGGACGAC
GACGTCCGTCGTCACGTCGATCACCGTCGTGATCCTCGCCGACGCGGTGTTCGCGATCCTCTTTCAGAACGTGGGGCTCG
GATGA

Upstream 100 bases:

>100_bases
CGCGCGGCGCGCGCCGCGCCGGCCGGCCGGGCAAAACGAGACTTCGCGCGGCGAGGCGGTTCGCTACAATGGCCGCTGTC
ACCGTTTCGCAAAATCGCCC

Downstream 100 bases:

>100_bases
GCGCGCGCGACGACGATTTCGTGATCGAGGTGCGCGACCTGACCAAGCGCTACGGGCGCAACGTCGTTCACGAGCATCTC
GATTTCGACGTGCGCGCGGG

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MNFQTPPGLSIDAGSQGRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRRLPDG
IALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLYGGIALLGGLIVDLLAVLRRPRTMPWTEISANV
YAAGTKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
LDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVF
GMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGLG

Sequences:

>Translated_374_residues
MNFQTPPGLSIDAGSQGRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRRLPDG
IALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLYGGIALLGGLIVDLLAVLRRPRTMPWTEISANV
YAAGTKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
LDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVF
GMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGLG
>Mature_374_residues
MNFQTPPGLSIDAGSQGRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRRLPDG
IALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLYGGIALLGGLIVDLLAVLRRPRTMPWTEISANV
YAAGTKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
LDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVF
GMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGLG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=214, Percent_Identity=33.1775700934579, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40003; Mature: 40003

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQTPPGLSIDAGSQGRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVER
CCCCCCCCCEECCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
LDHVGGQALWRVWGRRLPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGL
HHHHCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
FTFGEHLYGGIALLGGLIVDLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCHHHHHHHHHHHHH
VLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
LDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRS
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
LPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
DAVFAILFQNVGLG
HHHHHHHHHHCCCC
>Mature Secondary Structure
MNFQTPPGLSIDAGSQGRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVER
CCCCCCCCCEECCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
LDHVGGQALWRVWGRRLPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGL
HHHHCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
FTFGEHLYGGIALLGGLIVDLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCHHHHHHHHHHHHH
VLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
LDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRS
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
LPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
DAVFAILFQNVGLG
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]