Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126452241

Identifier: 126452241

GI number: 126452241

Start: 2330677

End: 2330916

Strand: Reverse

Name: 126452241

Synonym: BURPS1106A_2355

Alternate gene names: NA

Gene position: 2330916-2330677 (Counterclockwise)

Preceding gene: 126455172

Following gene: 126453934

Centisome position: 58.44

GC content: 68.75

Gene sequence:

>240_bases
GTGGATCGCTATCCGGCGCCGATGCGCAACCTGATGCCTTGGGTGCGCGATAACGCTGCCGAGATCGCCGATGCGTTTTT
GAGGGAGGGCATGTCGAAGGGCGGCGCGATACGTATCGCGATCGCGCAGGCGAAGCACTGGCTGCGCTCAGTGCACGGTG
CGGGCGCGAATGCGGCCAGCGGACGAGCGGGCATCGTGACGAGGGGCGACGCGTGCGGCGCGGGCACGGCCAACGCGTGA

Upstream 100 bases:

>100_bases
TTCGCTCGGATGCGGATGTTCCGCGCGCGGCGTGACGATTCGTGCGTTCGACGCGGTTCCATTCATTCGCCCCCGGTGCG
AAGGCAACATGCCGTGAACC

Downstream 100 bases:

>100_bases
TTCGCCGCGGCACGGCGGGGCTGAACCGGCCGCCGTGCGTCGGTAGTCAGTGGGGGCGGCGCGGGCTCGAATTGGACGGC
GGCGGCCGCGCCAGGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MDRYPAPMRNLMPWVRDNAAEIADAFLREGMSKGGAIRIAIAQAKHWLRSVHGAGANAASGRAGIVTRGDACGAGTANA

Sequences:

>Translated_79_residues
MDRYPAPMRNLMPWVRDNAAEIADAFLREGMSKGGAIRIAIAQAKHWLRSVHGAGANAASGRAGIVTRGDACGAGTANA
>Mature_79_residues
MDRYPAPMRNLMPWVRDNAAEIADAFLREGMSKGGAIRIAIAQAKHWLRSVHGAGANAASGRAGIVTRGDACGAGTANA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8219; Mature: 8219

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRYPAPMRNLMPWVRDNAAEIADAFLREGMSKGGAIRIAIAQAKHWLRSVHGAGANAAS
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC
GRAGIVTRGDACGAGTANA
CCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MDRYPAPMRNLMPWVRDNAAEIADAFLREGMSKGGAIRIAIAQAKHWLRSVHGAGANAAS
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC
GRAGIVTRGDACGAGTANA
CCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA