| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is phnE [H]
Identifier: 126452214
GI number: 126452214
Start: 3259351
End: 3260166
Strand: Reverse
Name: phnE [H]
Synonym: BURPS1106A_3336
Alternate gene names: 126452214
Gene position: 3260166-3259351 (Counterclockwise)
Preceding gene: 126454619
Following gene: 126453355
Centisome position: 81.74
GC content: 69.98
Gene sequence:
>816_bases ATGAACGCGCGCGAGCCGGCGGGCGCCGCGCTCGGCGAACCGCTCGCAACGGCCGCCGCCGCGCGCCGCGGCTGGCGGGC GTGGCTTGCGTGGGCGCTCGCGTTCGCGATTCTCGGCGGCACGTGGCGCAGCGCCGACATGCGGCCGCTCGATCTGCTTG CCGAGTCCGCGAACATGGGCGAGTTCGCGCGCGGCTTCTTTCCGCCGGACTTCTCCGAATGGCGGTACTACGCGAGCGAG ATGGGCGTGACGCTGTCGATCGCGCTCTGGGGCACGGCGCTCGCGATCGTGAGCGCCGTGCCGTTCGGCCTGATGTCGGC GCGCAACATCGCGCCCGCGTGGCTGCTGCATCCGGTGCGGCGCGCGATGGACAGCTGCCGTGCGATCAACGAGATGGTGT TCGCGATGCTGTTCATCGTCGCCGTCGGTCTCGGGCCGTTCTCCGGCGTGCTCGCGCTGTGGGTTCACACGACGGGCGTG CTCGCGAAGCTTTTCGCGGAGGCGGTGGAGGCGGTCGATCCGCGTCCGGCCGAGGGCGTGCGCGCCGCCGGCGCGACGCC GCTCGACGAGATCGTCTATGCGGTGCTGCCGCAGGTGCTGCCGTTGTGGATTTCATATGCGCTGTACCGGTTCGAATCGA ACGTGCGCTCGGCGATGGTGGTCGGGATGGTCGGCGCGGGCGGGATTGGCGTCGTGCTGTACGAGGCGATTCGTTCGTTC AACTATGCGCAGACGGCCGCGCTGCTCGTCATCGTCATCGCGGTCGTGACGCTGATCGACATGAGCTCCGCGTGGCTGCG GGCGAGGGCGATCTGA
Upstream 100 bases:
>100_bases CCGATGCGCGCCGCGCGCAGCTCGCGGCGCTCGATGCGAGGCTCGCCGCGCTCGACGCGTCCGGCGCGGCGGATGCGTCG AGCGCGCAGGCGGACAAGCG
Downstream 100 bases:
>100_bases CGCGCGAGGCGGCGCGAGGTGCGCGCGACGGGTTTGCGATGCGCTCGGGACGTCGAGCGCGCCGCGCGCGCGGCCGCTCG CGGAGGGAAAGAGAGGCCGG
Product: phosphonate ABC transporter, permease protein
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNAREPAGAALGEPLATAAAARRGWRAWLAWALAFAILGGTWRSADMRPLDLLAESANMGEFARGFFPPDFSEWRYYASE MGVTLSIALWGTALAIVSAVPFGLMSARNIAPAWLLHPVRRAMDSCRAINEMVFAMLFIVAVGLGPFSGVLALWVHTTGV LAKLFAEAVEAVDPRPAEGVRAAGATPLDEIVYAVLPQVLPLWISYALYRFESNVRSAMVVGMVGAGGIGVVLYEAIRSF NYAQTAALLVIVIAVVTLIDMSSAWLRARAI
Sequences:
>Translated_271_residues MNAREPAGAALGEPLATAAAARRGWRAWLAWALAFAILGGTWRSADMRPLDLLAESANMGEFARGFFPPDFSEWRYYASE MGVTLSIALWGTALAIVSAVPFGLMSARNIAPAWLLHPVRRAMDSCRAINEMVFAMLFIVAVGLGPFSGVLALWVHTTGV LAKLFAEAVEAVDPRPAEGVRAAGATPLDEIVYAVLPQVLPLWISYALYRFESNVRSAMVVGMVGAGGIGVVLYEAIRSF NYAQTAALLVIVIAVVTLIDMSSAWLRARAI >Mature_271_residues MNAREPAGAALGEPLATAAAARRGWRAWLAWALAFAILGGTWRSADMRPLDLLAESANMGEFARGFFPPDFSEWRYYASE MGVTLSIALWGTALAIVSAVPFGLMSARNIAPAWLLHPVRRAMDSCRAINEMVFAMLFIVAVGLGPFSGVLALWVHTTGV LAKLFAEAVEAVDPRPAEGVRAAGATPLDEIVYAVLPQVLPLWISYALYRFESNVRSAMVVGMVGAGGIGVVLYEAIRSF NYAQTAALLVIVIAVVTLIDMSSAWLRARAI
Specific function: Part of the binding-protein-dependent transport system for phosphonates; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29085; Mature: 29085
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAREPAGAALGEPLATAAAARRGWRAWLAWALAFAILGGTWRSADMRPLDLLAESANMG CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCH EFARGFFPPDFSEWRYYASEMGVTLSIALWGTALAIVSAVPFGLMSARNIAPAWLLHPVR HHHHCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RAMDSCRAINEMVFAMLFIVAVGLGPFSGVLALWVHTTGVLAKLFAEAVEAVDPRPAEGV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RAAGATPLDEIVYAVLPQVLPLWISYALYRFESNVRSAMVVGMVGAGGIGVVLYEAIRSF HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NYAQTAALLVIVIAVVTLIDMSSAWLRARAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNAREPAGAALGEPLATAAAARRGWRAWLAWALAFAILGGTWRSADMRPLDLLAESANMG CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCH EFARGFFPPDFSEWRYYASEMGVTLSIALWGTALAIVSAVPFGLMSARNIAPAWLLHPVR HHHHCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RAMDSCRAINEMVFAMLFIVAVGLGPFSGVLALWVHTTGVLAKLFAEAVEAVDPRPAEGV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RAAGATPLDEIVYAVLPQVLPLWISYALYRFESNVRSAMVVGMVGAGGIGVVLYEAIRSF HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NYAQTAALLVIVIAVVTLIDMSSAWLRARAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]