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The map label for this gene is gap [H]

Identifier: 126452201

GI number: 126452201

Start: 3373766

End: 3374776

Strand: Reverse

Name: gap [H]

Synonym: BURPS1106A_3467

Alternate gene names: 126452201

Gene position: 3374776-3373766 (Counterclockwise)

Preceding gene: 126454749

Following gene: 126452840

Centisome position: 84.61

GC content: 64.0

Gene sequence:

>1011_bases
ATGACGATTCGCGTTGCAATCAACGGTTACGGCCGCATCGGCCGCAACACGCTGCGCGCTTTCTACGAAAACGGCAAGAA
GCACGATCTCGAGATCGTTGCGATCAACGATCTGGGCGACGCGAAGACCAACGCGCACCTGACGCAGTACGACACCGCGC
ACGGCAAGTTCCCGGGCGAAGTGTCGGTCGACGGTGATTACCTCGTCGTGAACGGCGACAGGATTCGCGTGCTCGCGAAC
CGCAACCCGGCCGAGCTGCCGTGGGGCGAGCTGGGCGTCGACGTCGTGATGGAATGCACGGGCTTCTTCACGTCGAAGGA
AAAGGCGAGCGCGCACCTGAAGGGCGGCGCGAAGAAGGTGATCATCTCGGCGCCGGGCGGCAAGGACGTCGACGCGACGA
TCGTCTACGGCGTGAACCACGACGTGCTGAAGGCCGAGCACACCGTCATCTCGAACGCATCGTGCACGACGAACTGCCTG
GCTCCGCTCGTCAAGCCGCTGAACGACAAGATCGGCCTCGAAACCGGCCTGATGACGACGATTCATGCCTACACGAACGA
CCAGGTGCTGACGGACGTCTACCACGAGGACCTGCGCCGCGCGCGCTCGGCGACGCACAGCCAGATCCCGACGAAGACGG
GTGCGGCGGCCGCCGTCGGCCTCGTGCTGCCGGAGCTGAACGGCAAGCTCGACGGCTACGCGATCCGCGTGCCGACCATC
AACGTGTCGATCGTCGATCTGTCGTTCATCGCGAAGCGCGACACGACGGCGGCCGAAGTCAACGCGATCATGAAGGAAGC
GTCGGAAGGCGCGCTGAAGGGCATCCTCGGCTACAACGAGGCGCCGCTCGTGTCGATCGACTTCAACCACAACCCGGCTT
CGTCGACGTTCGACGCGACGCTCACGAAGGTGTCGGGCCGTCTCGTGAAGGTGTCGAGCTGGTACGACAACGAGTGGGGC
TTCTCGAACCGCATGCTGGATACGGCGATCGCGCTCGCGAACGCGAAGTGA

Upstream 100 bases:

>100_bases
GCTCGCGTAACCCATTCGACGCCCGGGCGGCCGTGCCCCGCGCCGGCCGGGCGCGCGTGAAGCTGCACGAAGTATTTTTT
CAGCCATCAGGAGATACATC

Downstream 100 bases:

>100_bases
TCCCCGCGCGCGGGCGCCGCGAGGCGGCCCGCGTCGCGATCGAGCCCGGTCCGGTTTCATGCCGGCCGGGCTTTTTTGTC
GCCGTCGCTTTTGTCACCGT

Product: glyceraldehyde-3-phosphate dehydrogenase, type I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTIRVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSVDGDYLVVNGDRIRVLAN
RNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCL
APLVKPLNDKIGLETGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDATLTKVSGRLVKVSSWYDNEWG
FSNRMLDTAIALANAK

Sequences:

>Translated_336_residues
MTIRVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSVDGDYLVVNGDRIRVLAN
RNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCL
APLVKPLNDKIGLETGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDATLTKVSGRLVKVSSWYDNEWG
FSNRMLDTAIALANAK
>Mature_335_residues
TIRVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSVDGDYLVVNGDRIRVLANR
NPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCLA
PLVKPLNDKIGLETGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTIN
VSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDATLTKVSGRLVKVSSWYDNEWGF
SNRMLDTAIALANAK

Specific function: Could Play A Role In Pyridoxal 5'-Phosphate Synthesis. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7669492, Length=336, Percent_Identity=49.1071428571429, Blast_Score=301, Evalue=7e-82,
Organism=Homo sapiens, GI7657116, Length=330, Percent_Identity=42.4242424242424, Blast_Score=243, Evalue=2e-64,
Organism=Escherichia coli, GI1789295, Length=334, Percent_Identity=53.8922155688623, Blast_Score=391, Evalue=1e-110,
Organism=Escherichia coli, GI1788079, Length=329, Percent_Identity=51.6717325227964, Blast_Score=316, Evalue=1e-87,
Organism=Caenorhabditis elegans, GI17534677, Length=333, Percent_Identity=49.2492492492492, Blast_Score=293, Evalue=1e-79,
Organism=Caenorhabditis elegans, GI17534679, Length=333, Percent_Identity=49.2492492492492, Blast_Score=292, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI32566163, Length=335, Percent_Identity=49.5522388059701, Blast_Score=285, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI17568413, Length=335, Percent_Identity=49.5522388059701, Blast_Score=285, Evalue=3e-77,
Organism=Saccharomyces cerevisiae, GI6322468, Length=336, Percent_Identity=45.5357142857143, Blast_Score=296, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6321631, Length=336, Percent_Identity=45.8333333333333, Blast_Score=294, Evalue=2e-80,
Organism=Saccharomyces cerevisiae, GI6322409, Length=336, Percent_Identity=45.2380952380952, Blast_Score=293, Evalue=3e-80,
Organism=Drosophila melanogaster, GI85725000, Length=328, Percent_Identity=49.390243902439, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI22023983, Length=328, Percent_Identity=49.390243902439, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI17933600, Length=328, Percent_Identity=48.780487804878, Blast_Score=290, Evalue=9e-79,
Organism=Drosophila melanogaster, GI18110149, Length=328, Percent_Identity=48.780487804878, Blast_Score=290, Evalue=9e-79,
Organism=Drosophila melanogaster, GI19922412, Length=330, Percent_Identity=46.0606060606061, Blast_Score=268, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 36118; Mature: 35987

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGE
CEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCE
VSVDGDYLVVNGDRIRVLANRNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCEEE
IISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCLAPLVKPLNDKIGLETGLMTT
EEECCCCCCCCEEEEEECCCCCEECCCEEECCCCCCHHHHHHHHHHCCHHCCCCCCCEEE
IHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCEEEEEEEE
NVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDAT
EEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHH
LTKVSGRLVKVSSWYDNEWGFSNRMLDTAIALANAK
HEECCCEEEEEEECCCCCCCCCCHHHHHHHEEECCC
>Mature Secondary Structure 
TIRVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGE
EEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCE
VSVDGDYLVVNGDRIRVLANRNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCEEE
IISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCLAPLVKPLNDKIGLETGLMTT
EEECCCCCCCCEEEEEECCCCCEECCCEEECCCCCCHHHHHHHHHHCCHHCCCCCCCEEE
IHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCEEEEEEEE
NVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDAT
EEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHH
LTKVSGRLVKVSSWYDNEWGFSNRMLDTAIALANAK
HEECCCEEEEEEECCCCCCCCCCHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763137 [H]