Click here to switch to the map view.

The map label for this gene is 126452186

Identifier: 126452186

GI number: 126452186

Start: 87362

End: 87685

Strand: Direct

Name: 126452186

Synonym: BURPS1106A_0095

Alternate gene names: NA

Gene position: 87362-87685 (Clockwise)

Preceding gene: 126451517

Following gene: 126455121

Centisome position: 2.19

GC content: 59.26

Gene sequence:

>324_bases
ATGCCAACTCTAGGCGAAAAGATCCGCACGCTGCGGAAACGGCAAGGGCTCACGCTCGATCAGCTGGCCCTTCAGGTCAG
CGCGTCCAAGTCATCGATCTGGGAGCTGGAGAATAAGGAAAAGGCGCGCCCGTCGGCCGACAGGATCGATGCGATCGCGC
GAGCGCTCGGCGTCACCTCCGCGTATCTCCTGGACGACACGCAAACCGAGCCATCCAGGAAGGTTGCCGACGAGGCGTTC
TTCCGAAAGTATGAACAGCTGGACGAGCCCGTTAAAAAGCAGCTCCAGGACATCCTCGAAGTTCTCGACCGAAAACGTGA
CTGA

Upstream 100 bases:

>100_bases
TCGGTCTTCTTGCCTTTTCGGTTCGGAAGTCCGACAATGAAAATACTGGACTTCAGAATTCTGGAAGTCAAGCATTTTTT
TTATCGAAATTCCGAACATC

Downstream 100 bases:

>100_bases
TCAGCCTCTGTCGCCGCAGCGCGAAGCAATGAAGCTGGTGCAGCTCTGGCGGGCTGTACATGGCGCAGCGTTTCCGATCC
GAGCTGGCGAACTGGCCATT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulator SinR; HTH-Type Transcriptional Regulator; Helix-Turn-Helix Transcriptional Regulatory Protein; Transcriptional Regulator Xre Family; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Motif

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPTLGEKIRTLRKRQGLTLDQLALQVSASKSSIWELENKEKARPSADRIDAIARALGVTSAYLLDDTQTEPSRKVADEAF
FRKYEQLDEPVKKQLQDILEVLDRKRD

Sequences:

>Translated_107_residues
MPTLGEKIRTLRKRQGLTLDQLALQVSASKSSIWELENKEKARPSADRIDAIARALGVTSAYLLDDTQTEPSRKVADEAF
FRKYEQLDEPVKKQLQDILEVLDRKRD
>Mature_106_residues
PTLGEKIRTLRKRQGLTLDQLALQVSASKSSIWELENKEKARPSADRIDAIARALGVTSAYLLDDTQTEPSRKVADEAFF
RKYEQLDEPVKKQLQDILEVLDRKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12256; Mature: 12125

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLGEKIRTLRKRQGLTLDQLALQVSASKSSIWELENKEKARPSADRIDAIARALGVTS
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHH
AYLLDDTQTEPSRKVADEAFFRKYEQLDEPVKKQLQDILEVLDRKRD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PTLGEKIRTLRKRQGLTLDQLALQVSASKSSIWELENKEKARPSADRIDAIARALGVTS
CCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHH
AYLLDDTQTEPSRKVADEAFFRKYEQLDEPVKKQLQDILEVLDRKRD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA