| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452176
Identifier: 126452176
GI number: 126452176
Start: 2153798
End: 2154394
Strand: Reverse
Name: 126452176
Synonym: BURPS1106A_2167
Alternate gene names: NA
Gene position: 2154394-2153798 (Counterclockwise)
Preceding gene: 126454323
Following gene: 126454830
Centisome position: 54.02
GC content: 72.53
Gene sequence:
>597_bases TTGATTCCGCGATCGGTTTCGGCGCCGCCATCGGCGTCGACAGCGGTATCGACAGCGGTATCGACAGCGCGTTCGCGCTT GCCATCGCCTTTGCTTTTATCGGCGCCGGCGTCGGCGCCGATGACGGTGCGCGCGCGGCCGTCGGCGCGGCGGGGGCCGG CGCCGCGCGCGTCGATGGGCAGCGTGCACGTGGCTGCGCGAGAGCGCGAACCTTCGTCGCGCCGCGCCCCCGGCATTCCC GCCGTATCCGAACCCATGCGCGAGCCGCGAAGCGATGCGCAAGCGAGTGCCGAAGCGGGCGACGCGCAGCGAAGGCTCCC GCGGGCGCCGGGCGTCGCCGCCGACTGGCGGGCTGATCTGGATTCGCTCGGGGCTGCCCGGCCGTTACGGCAGGCAGCCG CGACGGCCGCGATCGGTGCGATGGGCGCGTCATCCGGCGTGACGCCTGCACGGGCGGAAACCGCGACGTCGACGCTGGCG CGCACCATGTCGAAAGCGAGCCGCGCCGATTGCCGGAACGCGCATTCGGGCATGGGCCTGCTTGCGATTCCGGCGCTCGC GCTCGACGCCGTCACGGATACCGGTTGCAAATGGTGA
Upstream 100 bases:
>100_bases CGGGCTCGCGTGGCTCGCGATCGAGCGCTGGGCACTGCCGGCAGGCACGGCCGCGGCGCCCGATGCGCCGCGCCCGGCGA GGCGGGCGCTCGTCGTGACG
Downstream 100 bases:
>100_bases TGGCTCGCTGCGGGCGTTCCCCGCGCGCCGTCGCTCGCGCAGCGCCATCGCGTGCCGCTGACGCGCCGGGTTGGGACGCC CGGCGAGGTGCCCGCCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MIPRSVSAPPSASTAVSTAVSTARSRLPSPLLLSAPASAPMTVRARPSARRGPAPRASMGSVHVAAREREPSSRRAPGIP AVSEPMREPRSDAQASAEAGDAQRRLPRAPGVAADWRADLDSLGAARPLRQAAATAAIGAMGASSGVTPARAETATSTLA RTMSKASRADCRNAHSGMGLLAIPALALDAVTDTGCKW
Sequences:
>Translated_198_residues MIPRSVSAPPSASTAVSTAVSTARSRLPSPLLLSAPASAPMTVRARPSARRGPAPRASMGSVHVAAREREPSSRRAPGIP AVSEPMREPRSDAQASAEAGDAQRRLPRAPGVAADWRADLDSLGAARPLRQAAATAAIGAMGASSGVTPARAETATSTLA RTMSKASRADCRNAHSGMGLLAIPALALDAVTDTGCKW >Mature_198_residues MIPRSVSAPPSASTAVSTAVSTARSRLPSPLLLSAPASAPMTVRARPSARRGPAPRASMGSVHVAAREREPSSRRAPGIP AVSEPMREPRSDAQASAEAGDAQRRLPRAPGVAADWRADLDSLGAARPLRQAAATAAIGAMGASSGVTPARAETATSTLA RTMSKASRADCRNAHSGMGLLAIPALALDAVTDTGCKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20119; Mature: 20119
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPRSVSAPPSASTAVSTAVSTARSRLPSPLLLSAPASAPMTVRARPSARRGPAPRASMG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCC SVHVAAREREPSSRRAPGIPAVSEPMREPRSDAQASAEAGDAQRRLPRAPGVAADWRADL CEEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCH DSLGAARPLRQAAATAAIGAMGASSGVTPARAETATSTLARTMSKASRADCRNAHSGMGL HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LAIPALALDAVTDTGCKW HHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIPRSVSAPPSASTAVSTAVSTARSRLPSPLLLSAPASAPMTVRARPSARRGPAPRASMG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCC SVHVAAREREPSSRRAPGIPAVSEPMREPRSDAQASAEAGDAQRRLPRAPGVAADWRADL CEEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCH DSLGAARPLRQAAATAAIGAMGASSGVTPARAETATSTLARTMSKASRADCRNAHSGMGL HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LAIPALALDAVTDTGCKW HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA