| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452172
Identifier: 126452172
GI number: 126452172
Start: 2106511
End: 2107038
Strand: Direct
Name: 126452172
Synonym: BURPS1106A_2114
Alternate gene names: NA
Gene position: 2106511-2107038 (Clockwise)
Preceding gene: 126453392
Following gene: 126454828
Centisome position: 52.82
GC content: 67.42
Gene sequence:
>528_bases TTGACGGGAGGCGATCCTGCACCCGGACGACGTCCGGACACCGAACGATTATCGTTTTTCCGGGCCGCGCGCCCGAGTGA TCTCGATCAAGCAAAAGCGGCAAACGCACCCCGCGCCCCACGCCGCGATGCGCGCCGCGATGCGTGCCGCGCGAGCGACG CCGCGCCGCGCGCGAGTCGCCGAATGCCGCCCCCCTTCGTCTGCCCCGGTCCGCCCGGAGCGGCTTTCCCCGCCGCGCGC CAGGCGGCGCGCGAGCCGCCCGAACGCACGCGGACCTGCGTTTCGCCGACCGCCGCCCGCGTTCGTCCGCGCGATTTGTT TGACGCCGTGCAACCTCGCCCCCAACGATGCCGGCCGCCGCGCGCCGACGCGCGCCTTTTCTTGAGGTCGATCATTTCTC GCGAATCGGCGGGACACGACACTAGCCGCGGAAATCTTTCCGTCAAATCACAAGGGAATCACGAGAACAAAAATTTCGAT CGCCTTACTCGCGTGTGTTCATTTGCAGTCATGTCTGGCCCGCCATGA
Upstream 100 bases:
>100_bases TCAGCGCGAGCCACGCCATCAGCGTGACGACGACGGCGAGCGCAAGCGACGATCCGACGAGTTTCTTCAAACCGGGCAAC GGTGGAATTTCCGAAAACGA
Downstream 100 bases:
>100_bases GGGGGAAGTCTATCGAGCGACAGGTTGTCGCAATGCGGCGCAAATCGTCACCGGCCAGCCCGGATTACCGGCATCGAAAG CGGGAACGGGCCGTTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTGGDPAPGRRPDTERLSFFRAARPSDLDQAKAANAPRAPRRDARRDACRASDAAPRASRRMPPPFVCPGPPGAAFPAAR QAAREPPERTRTCVSPTAARVRPRDLFDAVQPRPQRCRPPRADARLFLRSIISRESAGHDTSRGNLSVKSQGNHENKNFD RLTRVCSFAVMSGPP
Sequences:
>Translated_175_residues MTGGDPAPGRRPDTERLSFFRAARPSDLDQAKAANAPRAPRRDARRDACRASDAAPRASRRMPPPFVCPGPPGAAFPAAR QAAREPPERTRTCVSPTAARVRPRDLFDAVQPRPQRCRPPRADARLFLRSIISRESAGHDTSRGNLSVKSQGNHENKNFD RLTRVCSFAVMSGPP >Mature_174_residues TGGDPAPGRRPDTERLSFFRAARPSDLDQAKAANAPRAPRRDARRDACRASDAAPRASRRMPPPFVCPGPPGAAFPAARQ AAREPPERTRTCVSPTAARVRPRDLFDAVQPRPQRCRPPRADARLFLRSIISRESAGHDTSRGNLSVKSQGNHENKNFDR LTRVCSFAVMSGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19159; Mature: 19028
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGDPAPGRRPDTERLSFFRAARPSDLDQAKAANAPRAPRRDARRDACRASDAAPRASR CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHC RMPPPFVCPGPPGAAFPAARQAAREPPERTRTCVSPTAARVRPRDLFDAVQPRPQRCRPP CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHCCHHHHHHHHCCCHHHCCCC RADARLFLRSIISRESAGHDTSRGNLSVKSQGNHENKNFDRLTRVCSFAVMSGPP CHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGGDPAPGRRPDTERLSFFRAARPSDLDQAKAANAPRAPRRDARRDACRASDAAPRASR CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHC RMPPPFVCPGPPGAAFPAARQAAREPPERTRTCVSPTAARVRPRDLFDAVQPRPQRCRPP CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHCCHHHHHHHHCCCHHHCCCC RADARLFLRSIISRESAGHDTSRGNLSVKSQGNHENKNFDRLTRVCSFAVMSGPP CHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA