| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452168
Identifier: 126452168
GI number: 126452168
Start: 1394958
End: 1395443
Strand: Direct
Name: 126452168
Synonym: BURPS1106A_1421
Alternate gene names: NA
Gene position: 1394958-1395443 (Clockwise)
Preceding gene: 126452043
Following gene: 126451849
Centisome position: 34.97
GC content: 70.58
Gene sequence:
>486_bases ATGCGCTTGAGCCAGGCGGGATGGACCGCGCTGCGCATCCGCGAACACGCGGTCATGGCCTACTACAACGACGCGGCGAA CAACTGCACGTATGGCGTCGGCACGCTCGCGCACACCGGGCCATGCACGCCTGACGAACGGGCGCGCCCGGTGACCGAGG CGCAGGTGAACGCGCAACTCGCCACGCGCGTCAGCCGCGCGGAGGCCGCGGTGCGCCGGAACGTCACCACCCGCGAGCTC ACGCAGGACCAGTTCGACGAGTTGGTCAGCTACACGTACAACGCCGGCGACACCGGCGCGCGCGCCGCGCTGCAGGCCGC GAACCTGAGCAACGACGCCGGTGTCGTGTCCCACATGAACCAGCGGGTCTACATCCACCCGCGCGATGCGAACGGCCGCC GCCTGGCGCCGGTACGCTCCAACGGGCTCGTCAACCGACGCCGTCTCGAGACTGCGCCGTTCCGCCGTCAGCCGGGTGCG CAATGA
Upstream 100 bases:
>100_bases TCCCGCCTCTCAGGTCCGATGATAAAGTGCAACGTCCACGCGGCCGTCGTGGCACGACAACAACGCTTTGAGAGGGCGAC AACAAATGGCAAACGAGAAC
Downstream 100 bases:
>100_bases GAAAGCTTGCCTTCGGACTGCTCCTTCTGGCATCCGCCAACGCATTCGCCGAGCAGTCGCCGGCCGATGAGATTTCGGCC CGCAGCGGGCTGCCGGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRLSQAGWTALRIREHAVMAYYNDAANNCTYGVGTLAHTGPCTPDERARPVTEAQVNAQLATRVSRAEAAVRRNVTTREL TQDQFDELVSYTYNAGDTGARAALQAANLSNDAGVVSHMNQRVYIHPRDANGRRLAPVRSNGLVNRRRLETAPFRRQPGA Q
Sequences:
>Translated_161_residues MRLSQAGWTALRIREHAVMAYYNDAANNCTYGVGTLAHTGPCTPDERARPVTEAQVNAQLATRVSRAEAAVRRNVTTREL TQDQFDELVSYTYNAGDTGARAALQAANLSNDAGVVSHMNQRVYIHPRDANGRRLAPVRSNGLVNRRRLETAPFRRQPGA Q >Mature_161_residues MRLSQAGWTALRIREHAVMAYYNDAANNCTYGVGTLAHTGPCTPDERARPVTEAQVNAQLATRVSRAEAAVRRNVTTREL TQDQFDELVSYTYNAGDTGARAALQAANLSNDAGVVSHMNQRVYIHPRDANGRRLAPVRSNGLVNRRRLETAPFRRQPGA Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17762; Mature: 17762
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSQAGWTALRIREHAVMAYYNDAANNCTYGVGTLAHTGPCTPDERARPVTEAQVNAQL CCCCCCCCEEEEEHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ATRVSRAEAAVRRNVTTRELTQDQFDELVSYTYNAGDTGARAALQAANLSNDAGVVSHMN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHCC QRVYIHPRDANGRRLAPVRSNGLVNRRRLETAPFRRQPGAQ CEEEEEECCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MRLSQAGWTALRIREHAVMAYYNDAANNCTYGVGTLAHTGPCTPDERARPVTEAQVNAQL CCCCCCCCEEEEEHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ATRVSRAEAAVRRNVTTRELTQDQFDELVSYTYNAGDTGARAALQAANLSNDAGVVSHMN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHCC QRVYIHPRDANGRRLAPVRSNGLVNRRRLETAPFRRQPGAQ CEEEEEECCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA