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The map label for this gene is glcD [H]

Identifier: 126452159

GI number: 126452159

Start: 1664932

End: 1666353

Strand: Reverse

Name: glcD [H]

Synonym: BURPS1106A_1704

Alternate gene names: 126452159

Gene position: 1666353-1664932 (Counterclockwise)

Preceding gene: 126455080

Following gene: 126451818

Centisome position: 41.78

GC content: 69.62

Gene sequence:

>1422_bases
ATGACCTCCACCTCCGCTTTCGTCGACGCCTGCCGCCACGCAATCGGCGCCGACCACGTGCTGACCGATTCCCACGACAC
CGCCCCGTTCCTGACCGACTGGCGCCGCCGCTACCAGGGCGCCGCGTGCGCGGTGCTCAGGCCGGCGAACACCGAGGAGG
TCGCCGCGCTCGTGAAGCTCGCGCTCGAGCATCGCGTCGCGCTCGTGCCCCAGGGCGGCAACACGGGCCTCGCGGGCGGC
GCGACGCCCGACGCGGGCGGCAAGCAGGCGGTGCTGAGTCTCGCGCGGCTGAACCGGGTGCGCGCGCTCGATCCGCACAA
CAACACGATCACCGTCGAAGCGGGCGTGATCCTCGCCGATGCGCAGGCGCGCGCGCGGGACGCCGACCGGCTCTTCGCGC
TGAGCCTCGCCGCGGAAGGCAGTTGCACGATCGGCGGCAACCTCGCGACGAACGCGGGCGGCACCGCGGTGCTGCGCTAC
GGCAATGCGCGCGAACTGTGCCTCGGGCTCGAGGTCGTCACGGCGCAGGGCGAGGTCTGGGACGGCCTGCGCGGGCTGCG
CAAGGACAACACCGGCTACGACCTGCGCGACCTTTTCATCGGCGCGGAAGGCACGCTCGGCATCATCACGGCCGCGGTGA
TGAAGTTGCATCCGCTTCCCGCCGCGAAGGTGACGGCGCTCGCCGCGCTCGAATCGCCGCACGCGGCGCTCGATTTCCTC
GCGCTCGCGCAGCGCGCGGCCGGCCCGCTGCTGACCGGCTTCGAGCTGATGTCGGACTTCTGCATGAAGCTTGTCGGCAA
GCACTACCCGCAGTTGCGCTATCCGTTCGACGCCGCGCATCCGCAGACCGTGCTGCTCGAATTGTCGGACAACGAAAGCG
AGGCGCACGCGCGCGCGCTCTTCGAGACGATGATGGAACAGGCGTTCGAGGCAGGGCTCGTCGTCGACGCGGTCGTCGCC
GAAAACCTCGCGCAGTCGCGCGCATTCTGGGATCTGCGCGAGCACATCCCGCTCGCGCAGGCCGACGAAGGGCTGAACAT
CAAGCACGACATCGCGGTGCCGATCTCGGCGATCGCGCACTTCATCGACGAGACCGACGCGGCGATCCAGGCGGCCGCGC
CCGGCGCGCGGATGGTGACGTTCGGGCATCTGGGCGACGGCAACCTGCACTACAACGTGCAGATGCCCGAGGGCGGCGAC
CCCAAGGCGTTCCTCGCCGAGCACCAGGCGCCCATCAACCGGATCGTCTACGACAACGTCCACAAGCATCGCGGCACGAT
CAGCGCCGAGCACGGCATCGGCCAGCTGAAAATCGACGATGCGCAACGCTACAAGGCCGCCGTCGAGATCAGGCTGATGC
GCGCGCTGAAGGCGGCGCTCGACCCGCTCAACCTGATGAACCCCGGCAAGGTGCTGCACTGA

Upstream 100 bases:

>100_bases
CGGGCGGAACAACCCGAGAAGCACGCGCCGGCGCGTGCGCGCGCGTCCGATCGCACCCGCCCCTGATTATTTCGTTTGCC
GGACATCCCGAACTCACGCC

Downstream 100 bases:

>100_bases
CGCCGCGCACCGCGACATCGAGGAGCCGCCCGTGAAAGTTCGCGTGCTGTCCGACCTGCATCTCGAATGCAACGAGCCCG
AGGCGATCGCCCACGCGCAG

Product: oxidoreductase, FAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTSTSAFVDACRHAIGADHVLTDSHDTAPFLTDWRRRYQGAACAVLRPANTEEVAALVKLALEHRVALVPQGGNTGLAGG
ATPDAGGKQAVLSLARLNRVRALDPHNNTITVEAGVILADAQARARDADRLFALSLAAEGSCTIGGNLATNAGGTAVLRY
GNARELCLGLEVVTAQGEVWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAKVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMKLVGKHYPQLRYPFDAAHPQTVLLELSDNESEAHARALFETMMEQAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISAIAHFIDETDAAIQAAAPGARMVTFGHLGDGNLHYNVQMPEGGD
PKAFLAEHQAPINRIVYDNVHKHRGTISAEHGIGQLKIDDAQRYKAAVEIRLMRALKAALDPLNLMNPGKVLH

Sequences:

>Translated_473_residues
MTSTSAFVDACRHAIGADHVLTDSHDTAPFLTDWRRRYQGAACAVLRPANTEEVAALVKLALEHRVALVPQGGNTGLAGG
ATPDAGGKQAVLSLARLNRVRALDPHNNTITVEAGVILADAQARARDADRLFALSLAAEGSCTIGGNLATNAGGTAVLRY
GNARELCLGLEVVTAQGEVWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAKVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMKLVGKHYPQLRYPFDAAHPQTVLLELSDNESEAHARALFETMMEQAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISAIAHFIDETDAAIQAAAPGARMVTFGHLGDGNLHYNVQMPEGGD
PKAFLAEHQAPINRIVYDNVHKHRGTISAEHGIGQLKIDDAQRYKAAVEIRLMRALKAALDPLNLMNPGKVLH
>Mature_472_residues
TSTSAFVDACRHAIGADHVLTDSHDTAPFLTDWRRRYQGAACAVLRPANTEEVAALVKLALEHRVALVPQGGNTGLAGGA
TPDAGGKQAVLSLARLNRVRALDPHNNTITVEAGVILADAQARARDADRLFALSLAAEGSCTIGGNLATNAGGTAVLRYG
NARELCLGLEVVTAQGEVWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAKVTALAALESPHAALDFLA
LAQRAAGPLLTGFELMSDFCMKLVGKHYPQLRYPFDAAHPQTVLLELSDNESEAHARALFETMMEQAFEAGLVVDAVVAE
NLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISAIAHFIDETDAAIQAAAPGARMVTFGHLGDGNLHYNVQMPEGGDP
KAFLAEHQAPINRIVYDNVHKHRGTISAEHGIGQLKIDDAQRYKAAVEIRLMRALKAALDPLNLMNPGKVLH

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=453, Percent_Identity=37.9690949227373, Blast_Score=278, Evalue=6e-75,
Organism=Homo sapiens, GI37595756, Length=479, Percent_Identity=31.7327766179541, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI37595754, Length=502, Percent_Identity=30.4780876494024, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI4501993, Length=178, Percent_Identity=30.3370786516854, Blast_Score=92, Evalue=9e-19,
Organism=Escherichia coli, GI1789351, Length=477, Percent_Identity=29.559748427673, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787977, Length=256, Percent_Identity=26.953125, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI48994907, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=465, Percent_Identity=33.7634408602151, Blast_Score=254, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI71992373, Length=438, Percent_Identity=28.9954337899543, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=438, Percent_Identity=28.310502283105, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71992392, Length=357, Percent_Identity=29.6918767507003, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=202, Percent_Identity=25.2475247524752, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320023, Length=458, Percent_Identity=35.1528384279476, Blast_Score=302, Evalue=8e-83,
Organism=Saccharomyces cerevisiae, GI6320764, Length=470, Percent_Identity=31.063829787234, Blast_Score=259, Evalue=6e-70,
Organism=Saccharomyces cerevisiae, GI6320027, Length=442, Percent_Identity=28.7330316742081, Blast_Score=142, Evalue=1e-34,
Organism=Drosophila melanogaster, GI18921117, Length=460, Percent_Identity=37.3913043478261, Blast_Score=279, Evalue=2e-75,
Organism=Drosophila melanogaster, GI24639277, Length=460, Percent_Identity=37.3913043478261, Blast_Score=279, Evalue=2e-75,
Organism=Drosophila melanogaster, GI24639275, Length=460, Percent_Identity=37.3913043478261, Blast_Score=279, Evalue=2e-75,
Organism=Drosophila melanogaster, GI24653753, Length=219, Percent_Identity=29.2237442922374, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50494; Mature: 50363

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTSAFVDACRHAIGADHVLTDSHDTAPFLTDWRRRYQGAACAVLRPANTEEVAALVKL
CCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ALEHRVALVPQGGNTGLAGGATPDAGGKQAVLSLARLNRVRALDPHNNTITVEAGVILAD
HHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEC
AQARARDADRLFALSLAAEGSCTIGGNLATNAGGTAVLRYGNARELCLGLEVVTAQGEVW
CHHHHCCCHHEEEEEEECCCCEEECCCEECCCCCEEEEEECCHHHEEEEEEEEECCCHHH
DGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAKVTALAALESPHAALDFL
HHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ALAQRAAGPLLTGFELMSDFCMKLVGKHYPQLRYPFDAAHPQTVLLELSDNESEAHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHH
FETMMEQAFEAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISAIAH
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHH
FIDETDAAIQAAAPGARMVTFGHLGDGNLHYNVQMPEGGDPKAFLAEHQAPINRIVYDNV
HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHCH
HKHRGTISAEHGIGQLKIDDAQRYKAAVEIRLMRALKAALDPLNLMNPGKVLH
HHHCCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSTSAFVDACRHAIGADHVLTDSHDTAPFLTDWRRRYQGAACAVLRPANTEEVAALVKL
CCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ALEHRVALVPQGGNTGLAGGATPDAGGKQAVLSLARLNRVRALDPHNNTITVEAGVILAD
HHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEC
AQARARDADRLFALSLAAEGSCTIGGNLATNAGGTAVLRYGNARELCLGLEVVTAQGEVW
CHHHHCCCHHEEEEEEECCCCEEECCCEECCCCCEEEEEECCHHHEEEEEEEEECCCHHH
DGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAKVTALAALESPHAALDFL
HHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ALAQRAAGPLLTGFELMSDFCMKLVGKHYPQLRYPFDAAHPQTVLLELSDNESEAHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHH
FETMMEQAFEAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISAIAH
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHH
FIDETDAAIQAAAPGARMVTFGHLGDGNLHYNVQMPEGGDPKAFLAEHQAPINRIVYDNV
HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHCH
HKHRGTISAEHGIGQLKIDDAQRYKAAVEIRLMRALKAALDPLNLMNPGKVLH
HHHCCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]