| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452095
Identifier: 126452095
GI number: 126452095
Start: 3606462
End: 3606719
Strand: Reverse
Name: 126452095
Synonym: BURPS1106A_3691
Alternate gene names: NA
Gene position: 3606719-3606462 (Counterclockwise)
Preceding gene: 126454874
Following gene: 126453821
Centisome position: 90.43
GC content: 61.24
Gene sequence:
>258_bases ATGGCCCATCCCCTTCACGATCCTCGTTACCAGCGCATCGCAGCGCTTCTGACGGAGCTGCGCAAAGCACGCGGACTGCT TCAGCAGGACGTGGCCGACCGAATCGGTCGCCCGCAAGGTTTCGTGTCGAAGGTCGAAAGCGGCATTCGCCGCTTGGACG TGATCGAACTCCTTGCTTTCTTGGGTGCGTTAGAGGCAGACCCGCACGACTTCATCGACCGGCTCCTTGAGCAGCCGATG TCCTCGCTGCCTCGTTGA
Upstream 100 bases:
>100_bases GCGGCAGACGCTGCGAACCACAGACTCATGAACATGGTTTCTCCTGAAATATATCGTATACGGATGTGGAATATCCTAGA TGCGGATTTAGTATTTTTGG
Downstream 100 bases:
>100_bases TGTGCTCTGTCAGTACTCGGCCGGCAGCAAAAAGGTCGTCGTGCAGCGATCGGCTTCCGTGATAAGCCAGACCGTACGGC CGCCGGGGAGCGTGTAGTTA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MAHPLHDPRYQRIAALLTELRKARGLLQQDVADRIGRPQGFVSKVESGIRRLDVIELLAFLGALEADPHDFIDRLLEQPM SSLPR
Sequences:
>Translated_85_residues MAHPLHDPRYQRIAALLTELRKARGLLQQDVADRIGRPQGFVSKVESGIRRLDVIELLAFLGALEADPHDFIDRLLEQPM SSLPR >Mature_84_residues AHPLHDPRYQRIAALLTELRKARGLLQQDVADRIGRPQGFVSKVESGIRRLDVIELLAFLGALEADPHDFIDRLLEQPMS SLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9639; Mature: 9508
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPLHDPRYQRIAALLTELRKARGLLQQDVADRIGRPQGFVSKVESGIRRLDVIELLAF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LGALEADPHDFIDRLLEQPMSSLPR HHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AHPLHDPRYQRIAALLTELRKARGLLQQDVADRIGRPQGFVSKVESGIRRLDVIELLAF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LGALEADPHDFIDRLLEQPMSSLPR HHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA