| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452080
Identifier: 126452080
GI number: 126452080
Start: 991563
End: 992105
Strand: Direct
Name: 126452080
Synonym: BURPS1106A_1014
Alternate gene names: NA
Gene position: 991563-992105 (Clockwise)
Preceding gene: 126454547
Following gene: 126453333
Centisome position: 24.86
GC content: 70.9
Gene sequence:
>543_bases ATGGCTTTGATTATCAAGAATCGCGAAGTGGTCGACGACGCGTGGCAACTCGTGCGCGCGGCCGAAGACGGCACGCTGCC CGCGCCCGATGCGCTGCCCGCCGGCCAGGTGCTCGTGCCGCTCGCGCTGTGGCAGACGGCGCGCGACGCGCTCGCCGCCT CGAGGACGAAGGACGCGCTCGGCGTGTGGCTCTCGCCCGACAGCGAACCCGCGGATCTCGCCGCGGACTTCGATCGCATC GCGGTGATCGGCGTCGAATTTCCGCGCTTCGCGGACGGCCGCGGCTACAGCATCGCGCGCCTGCTGCGCGAGCGCCACGG CTGGAAGGGTGAGCTGCGCGCGATCGGCGACGTGCTGCGCGACCAGCTCCTCTACATGTCGCGCTGCGGCTTCGACGCGT TCGCGGTGCGCGCGGACAAGGATGTTCGCGATGCGCTGAACGCATTCGGCGAATTCTCGCAGCGCTACCAGGGCGCGTTC GACGAGCCGGCGCCGCTGTTCCGCCGCCGCGCCGCGGCGGCCGAAGCGAAGGTGAGCGCATGA
Upstream 100 bases:
>100_bases CGACACGTACGAGCGCATCGGCATCGCGCCGTTCAAGGAGCGCGTCTACGCGGCGCGCCAGACCGCGCACGCGTAACACC CAGCGTAGAGGAATCAGCAG
Downstream 100 bases:
>100_bases GCGCCGCCCACGCCCCGGCCCTCACTCCGGCGCTCGCCGAGAAGAGCGCGCGGCTCGACGCGCTGCTCGCGCAAATCGCC GCGCGTCATCCGAAGGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MALIIKNREVVDDAWQLVRAAEDGTLPAPDALPAGQVLVPLALWQTARDALAASRTKDALGVWLSPDSEPADLAADFDRI AVIGVEFPRFADGRGYSIARLLRERHGWKGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDVRDALNAFGEFSQRYQGAF DEPAPLFRRRAAAAEAKVSA
Sequences:
>Translated_180_residues MALIIKNREVVDDAWQLVRAAEDGTLPAPDALPAGQVLVPLALWQTARDALAASRTKDALGVWLSPDSEPADLAADFDRI AVIGVEFPRFADGRGYSIARLLRERHGWKGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDVRDALNAFGEFSQRYQGAF DEPAPLFRRRAAAAEAKVSA >Mature_179_residues ALIIKNREVVDDAWQLVRAAEDGTLPAPDALPAGQVLVPLALWQTARDALAASRTKDALGVWLSPDSEPADLAADFDRIA VIGVEFPRFADGRGYSIARLLRERHGWKGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDVRDALNAFGEFSQRYQGAFD EPAPLFRRRAAAAEAKVSA
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19755; Mature: 19623
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIIKNREVVDDAWQLVRAAEDGTLPAPDALPAGQVLVPLALWQTARDALAASRTKDAL CEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHE GVWLSPDSEPADLAADFDRIAVIGVEFPRFADGRGYSIARLLRERHGWKGELRAIGDVLR EEEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH DQLLYMSRCGFDAFAVRADKDVRDALNAFGEFSQRYQGAFDEPAPLFRRRAAAAEAKVSA HHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALIIKNREVVDDAWQLVRAAEDGTLPAPDALPAGQVLVPLALWQTARDALAASRTKDAL EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHE GVWLSPDSEPADLAADFDRIAVIGVEFPRFADGRGYSIARLLRERHGWKGELRAIGDVLR EEEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH DQLLYMSRCGFDAFAVRADKDVRDALNAFGEFSQRYQGAFDEPAPLFRRRAAAAEAKVSA HHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA