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The map label for this gene is 126452076

Identifier: 126452076

GI number: 126452076

Start: 3355129

End: 3355545

Strand: Reverse

Name: 126452076

Synonym: BURPS1106A_3446

Alternate gene names: NA

Gene position: 3355545-3355129 (Counterclockwise)

Preceding gene: 126452456

Following gene: 126454757

Centisome position: 84.13

GC content: 63.55

Gene sequence:

>417_bases
ATGCTCTGGGTCAAGACTTTTCATATCGTGCTGATCGCGTCGTGGTTCGCGGGGCTGTTCTATTTGCCGCGCATCTACGT
GAACCTCGCGATGGAAACCGATCCCGCCGCGCGCCGGCGGCTGCTCGCGATGGCGCGCAAGCTGTTGCGCTTCATGACGA
TCATCGCGGTGCCCGCGCTCGCGTGCGGTTTGTGGCTGTGGCTCGTGATCGGCATCGGGCAGGGGCAGGGCTGGGTGCAC
GCGAAGCTCGGGGTCGTGCTGTTGCTTGTCGTCTATCACGCGTACTGCGGGCATTTGCTGAAGGTGTTCGAGCGCGGCGA
GAACCGCCGCTCGGACAAGTGGTATCGCGTGTTCAACGAATTGCCGGTGCTCGGGATGCTCGCGGCCGTCGCGCTCGCGG
TGATCAAGCCGTTTTGA

Upstream 100 bases:

>100_bases
CGCGCGGCCCGGTCGGGCTCGAAGGTCTCACGTCGCTGAAGTACGTGGTGCTCGGGCACGGCGAAGGGCGTGAGTGACGG
CGGGGGAACGATCGATGGCG

Downstream 100 bases:

>100_bases
GCGCGCGGGCGGCGCGGTTGGCGCGGTTGGCGTCGCGCCGCCTGACGGCGGTGCCGTCCGGATTCGATGAAGGTCGCCCC
GGCCCTGCGGCCGGGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPALACGLWLWLVIGIGQGQGWVH
AKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF

Sequences:

>Translated_138_residues
MLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPALACGLWLWLVIGIGQGQGWVH
AKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF
>Mature_138_residues
MLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPALACGLWLWLVIGIGQGQGWVH
AKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 15734; Mature: 15734

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ACGLWLWLVIGIGQGQGWVHAKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LPVLGMLAAVALAVIKPF
CCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ACGLWLWLVIGIGQGQGWVHAKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LPVLGMLAAVALAVIKPF
CCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]