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The map label for this gene is ubiX [C]

Identifier: 126452074

GI number: 126452074

Start: 3520010

End: 3520606

Strand: Direct

Name: ubiX [C]

Synonym: BURPS1106A_3617

Alternate gene names: 126452074

Gene position: 3520010-3520606 (Clockwise)

Preceding gene: 126451940

Following gene: 126455222

Centisome position: 88.25

GC content: 69.68

Gene sequence:

>597_bases
ATGGAGCCCCGTCCGGCGCCGCCGCGGCGCCTGATCGTCGCGATCACGGGTGCCACCGGCGCGATCTATGGCGTGCGCAT
GCTCGACATGCTGCGCGCGTCGGGCGGCGTCGAGACGCACCTGCTGATCTCGAGCGCCGGCTGGCTCAACATCCGGCACG
AACTGCAACTGTCGAAGGACGACGTGCTGGCGCGCGCCGACGTCGTCCATTCGGTGCGCGACGTCGGCGCGAGCATTGCA
TCCGGCTCGTTCGCGACCGAGGGCATGATCGTCGCGCCCTGCTCGATGAAGACGCTCGCGAGCATCGCGCACGGGCTATC
CGACAATCTCATCACCCGCGCCGCCGACGTCGCGCTGAAAGAGCGCCGCCGGCTCGTGCTGCTCGTGCGCGAGGCGCCGT
TCAACCTCGCGCACCTACGCAACATGACGGCCGTCACCGAGATGGGCGGCGTGATCTTCCCGCCGGTGCCCGCGTTCTAC
GCGATGCCGAAGACGATCGACGAGATCGTCGACCATACGGTCGCGCGCGTGCTCGACATGTTCGCGCTCGGCGCGCCGCT
CACCGCGCCGTGGCAAGGGCTGCGCGAGCACGGCTGA

Upstream 100 bases:

>100_bases
ACGTGAAGGGCGAATTCGTCGGCGGCTCGGACATCATGATGGAGATGTATCAGTCGGGCGAACTGCAGCAACTGTTCACC
GCCTGATTTTCCGCCCTGCG

Downstream 100 bases:

>100_bases
CGCCGCCTCGCCGGGCCGGGGCAGACCGGCAGCGTTTTCCCGTTCTCCGCCCGCTCGCGGATCGCTCCGGCTCCGATTCT
CCGGCGCCTCACGCCCCTCC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEPRPAPPRRLIVAITGATGAIYGVRMLDMLRASGGVETHLLISSAGWLNIRHELQLSKDDVLARADVVHSVRDVGASIA
SGSFATEGMIVAPCSMKTLASIAHGLSDNLITRAADVALKERRRLVLLVREAPFNLAHLRNMTAVTEMGGVIFPPVPAFY
AMPKTIDEIVDHTVARVLDMFALGAPLTAPWQGLREHG

Sequences:

>Translated_198_residues
MEPRPAPPRRLIVAITGATGAIYGVRMLDMLRASGGVETHLLISSAGWLNIRHELQLSKDDVLARADVVHSVRDVGASIA
SGSFATEGMIVAPCSMKTLASIAHGLSDNLITRAADVALKERRRLVLLVREAPFNLAHLRNMTAVTEMGGVIFPPVPAFY
AMPKTIDEIVDHTVARVLDMFALGAPLTAPWQGLREHG
>Mature_198_residues
MEPRPAPPRRLIVAITGATGAIYGVRMLDMLRASGGVETHLLISSAGWLNIRHELQLSKDDVLARADVVHSVRDVGASIA
SGSFATEGMIVAPCSMKTLASIAHGLSDNLITRAADVALKERRRLVLLVREAPFNLAHLRNMTAVTEMGGVIFPPVPAFY
AMPKTIDEIVDHTVARVLDMFALGAPLTAPWQGLREHG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=187, Percent_Identity=55.6149732620321, Blast_Score=208, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320746, Length=191, Percent_Identity=48.1675392670157, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.- [C]

Molecular weight: Translated: 21305; Mature: 21305

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRPAPPRRLIVAITGATGAIYGVRMLDMLRASGGVETHLLISSAGWLNIRHELQLSKD
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEHEEEECCHH
DVLARADVVHSVRDVGASIASGSFATEGMIVAPCSMKTLASIAHGLSDNLITRAADVALK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHH
ERRRLVLLVREAPFNLAHLRNMTAVTEMGGVIFPPVPAFYAMPKTIDEIVDHTVARVLDM
HCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCHHHHCHHHHHHHHHHHHHHHHHH
FALGAPLTAPWQGLREHG
HHCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MEPRPAPPRRLIVAITGATGAIYGVRMLDMLRASGGVETHLLISSAGWLNIRHELQLSKD
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEHEEEECCHH
DVLARADVVHSVRDVGASIASGSFATEGMIVAPCSMKTLASIAHGLSDNLITRAADVALK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHH
ERRRLVLLVREAPFNLAHLRNMTAVTEMGGVIFPPVPAFYAMPKTIDEIVDHTVARVLDM
HCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCHHHHCHHHHHHHHHHHHHHHHHH
FALGAPLTAPWQGLREHG
HHCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]