| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is mod [H]
Identifier: 126452068
GI number: 126452068
Start: 42115
End: 44148
Strand: Direct
Name: mod [H]
Synonym: BURPS1106A_0046
Alternate gene names: 126452068
Gene position: 42115-44148 (Clockwise)
Preceding gene: 126453561
Following gene: 126453237
Centisome position: 1.06
GC content: 68.29
Gene sequence:
>2034_bases ATGCAATTGATGGGAAGGATGATGCAAAAACTCGATGCGGCGAGCCCGGAGGCGCAATCCGCGGATCTCGTGGCCGCCAA CGTCGAGCGCCTGAAGGCGCTCTTTCCGGACGTGGTGACCGAAGGGCCGGACGGCGCGTCGGTGAATCTCGACGCGCTCG CGGCGCTGGTGGGCGCGAGCGCGGCGGCCGCGGCCGACGCCGACGAGAAGTACGGCCTGAACTGGCACGGCAAGCGGCGC GCGCGCCGGCTCGCGCTCACGCCGTCGACGGGCACGCTGCGCCCGTGCCCGCGCGAGAGCGCCGGCTGGGCGTCGACGCG CAACCTGATGATCGAGGGCGAGAACCTCGAGGTGCTGAAGCTGCTGCAGAAGAGCTACGCGGGGCGCGTGAAGCTCGTCT ACATCGATCCGCCGTACAACACCGGCAAGGATTTCGTCTATCCGGACAATTTCACCGACAGCCTGCGCCATTATCTCGAG CTGACCGGCCAGACGACGGGCGGCAAGCGGGTCACCAGCCACACCGACGCGAGCGGGCGCTTCCACACCGACTGGCTGAA CATGATCTACCCGCGCCTGAAGCTCGCGCGCGATCTGCTCACCGAGGACGGCGTGATCGCCGTGCACATCGACGAGCACG AACAGCACGCGCTCGTGCTCGTGATGCGCGAGATCTTCGGCGAAGACAACGAGCTCGGCGTCGCGGTGTGGGACAAGCGC AATCCGAAGGGCGATGCGCGCGGGATCGCGTACCAGCACGAATCGATCGTGCTGTTCGCGCGCGACGCTGAACGGCTGTT CGAGCGTGCGCCGCTCAAGCGCCCGAAACGCAACGCGCAGCGCATGCTGGGCGCGGCGCGCGAGGCGGTCGCCGGCGCGG CGACGATCGCGGACGCGAACGCCGCGTACCGCGGCTGGGTGAAGTCTCAGACGACGCTGTCGGGCGGCGAGGCGATGTAC GACCGAATCTCCGCCGACGGGCGCGTGTACCGCCTCGTGTCGATGGCGTGGCCGAACAAGAAGAAGGCGCCCGACGACTA CTTCGTGCCGCTCGTGCATCCGGTGACGGGCAAGCCGTGCCCCGTGCCCGAGCGCGGCTGGCGCAACCCGCCCGCGACGA TGCGCGCGCTCATCGACAAGGGCCTCGTCGAATTCGGCGCGGACGAGACCACGCAGCCGCAGCGGATCTATTTCCTCGAC GAGAACATGTACGAGAACGTGCCTTCGGTGCTGCCGTTCGGCGGCTCGGACGACGCGCTGATGAAGTCGCTCGGCATTCC TTTCGATCAGCCCAAGCCCGTCGAATTCGCCGCGTCGATCATCGGCTGGTGCACCGACGGCGACGATCTGATCGTCGACT TCTTCGGCGGCTCCGGCACGACCGCGCACGCGGTGATGGCGCTGAACGCGGCCGACGGCGGCCATCGCCGCTACGTGCTC GTGCAACTGCCCGAGCCGCTCGACGCCGACAGCAAGGACCAGAAGGCCGCCGCCGATTTCTGCGCGGCGCAGCGCGTGCC GCTCAATCTCGCCGAGCTGACGAAGGAGCGGCTGCGGCGCGCGGCGGCGCGCATCGCGGCCGAGCATCCGGGCACGCGGG CGGATCTCGGTTTTCGCGTGTTCAGGCTCGATTCGACGAACGTCTCCGAATGGGACCCGCGCGGCGACGACATCCAGCAG TCGCTGTTCGCGGCCGTCGAGCACATCAAGCCGAACCGCTCCGAGGAAGATCTGCTGTACGAACTGATGCTCAAGCTCGG CCTCGATCTGTGCGCGCCGATCGACGCACGCATGATCGCCGGCAAGGCGGTCTACGTGATCGACGGCGCGATCGTCGCGT GCTTCGATGCGCATATCGACCGCGCGTCGACCGACGCGCTCGGCGAGGGCATCGTCGGGCTGATCGCCGAAGCGGCCGAC GCGCGCGAGGTGACCTGCGTGTTCCGCGACAGCGGCTTCGCGGACGACGTCGCGAAGGTGAACCTGTCGGCGATTCTCGA GCAGCACGGCGTGAAGCGCATCCGCAGCCTCTGA
Upstream 100 bases:
>100_bases GCCGCCGCAAGTCCTTGACCTGCGCGTGACGGATCGCTAGCGTTTCGCCTTTGCCGCGCCGCGCGGGCCGAAAATCGGGT CCGCATGCGGGCGCGATGAC
Downstream 100 bases:
>100_bases TGCGCGCACGCGAGCCACACGCAGACAAGGAAGATTGAGCATGCAGTTGCATTTCGAGTCGGATCTCGACTACCAGCTCG AAGCGATCGAGGCGGTATGC
Product: type III DNA modification methyltransferase
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 677; Mature: 677
Protein sequence:
>677_residues MQLMGRMMQKLDAASPEAQSADLVAANVERLKALFPDVVTEGPDGASVNLDALAALVGASAAAAADADEKYGLNWHGKRR ARRLALTPSTGTLRPCPRESAGWASTRNLMIEGENLEVLKLLQKSYAGRVKLVYIDPPYNTGKDFVYPDNFTDSLRHYLE LTGQTTGGKRVTSHTDASGRFHTDWLNMIYPRLKLARDLLTEDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR NPKGDARGIAYQHESIVLFARDAERLFERAPLKRPKRNAQRMLGAAREAVAGAATIADANAAYRGWVKSQTTLSGGEAMY DRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPCPVPERGWRNPPATMRALIDKGLVEFGADETTQPQRIYFLD ENMYENVPSVLPFGGSDDALMKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTAHAVMALNAADGGHRRYVL VQLPEPLDADSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARIAAEHPGTRADLGFRVFRLDSTNVSEWDPRGDDIQQ SLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARMIAGKAVYVIDGAIVACFDAHIDRASTDALGEGIVGLIAEAAD AREVTCVFRDSGFADDVAKVNLSAILEQHGVKRIRSL
Sequences:
>Translated_677_residues MQLMGRMMQKLDAASPEAQSADLVAANVERLKALFPDVVTEGPDGASVNLDALAALVGASAAAAADADEKYGLNWHGKRR ARRLALTPSTGTLRPCPRESAGWASTRNLMIEGENLEVLKLLQKSYAGRVKLVYIDPPYNTGKDFVYPDNFTDSLRHYLE LTGQTTGGKRVTSHTDASGRFHTDWLNMIYPRLKLARDLLTEDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR NPKGDARGIAYQHESIVLFARDAERLFERAPLKRPKRNAQRMLGAAREAVAGAATIADANAAYRGWVKSQTTLSGGEAMY DRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPCPVPERGWRNPPATMRALIDKGLVEFGADETTQPQRIYFLD ENMYENVPSVLPFGGSDDALMKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTAHAVMALNAADGGHRRYVL VQLPEPLDADSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARIAAEHPGTRADLGFRVFRLDSTNVSEWDPRGDDIQQ SLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARMIAGKAVYVIDGAIVACFDAHIDRASTDALGEGIVGLIAEAAD AREVTCVFRDSGFADDVAKVNLSAILEQHGVKRIRSL >Mature_677_residues MQLMGRMMQKLDAASPEAQSADLVAANVERLKALFPDVVTEGPDGASVNLDALAALVGASAAAAADADEKYGLNWHGKRR ARRLALTPSTGTLRPCPRESAGWASTRNLMIEGENLEVLKLLQKSYAGRVKLVYIDPPYNTGKDFVYPDNFTDSLRHYLE LTGQTTGGKRVTSHTDASGRFHTDWLNMIYPRLKLARDLLTEDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR NPKGDARGIAYQHESIVLFARDAERLFERAPLKRPKRNAQRMLGAAREAVAGAATIADANAAYRGWVKSQTTLSGGEAMY DRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPCPVPERGWRNPPATMRALIDKGLVEFGADETTQPQRIYFLD ENMYENVPSVLPFGGSDDALMKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTAHAVMALNAADGGHRRYVL VQLPEPLDADSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARIAAEHPGTRADLGFRVFRLDSTNVSEWDPRGDDIQQ SLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARMIAGKAVYVIDGAIVACFDAHIDRASTDALGEGIVGLIAEAAD AREVTCVFRDSGFADDVAKVNLSAILEQHGVKRIRSL
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 74125; Mature: 74125
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLMGRMMQKLDAASPEAQSADLVAANVERLKALFPDVVTEGPDGASVNLDALAALVGAS CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC AAAAADADEKYGLNWHGKRRARRLALTPSTGTLRPCPRESAGWASTRNLMIEGENLEVLK HHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH LLQKSYAGRVKLVYIDPPYNTGKDFVYPDNFTDSLRHYLELTGQTTGGKRVTSHTDASGR HHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC FHTDWLNMIYPRLKLARDLLTEDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR EEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC NPKGDARGIAYQHESIVLFARDAERLFERAPLKRPKRNAQRMLGAAREAVAGAATIADAN CCCCCCCCEEEECCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC AAYRGWVKSQTTLSGGEAMYDRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPC HHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC PVPERGWRNPPATMRALIDKGLVEFGADETTQPQRIYFLDENMYENVPSVLPFGGSDDAL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCHHH MKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTAHAVMALNAADGGHRRYVL HHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEE VQLPEPLDADSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARIAAEHPGTRADLGFRV EECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE FRLDSTNVSEWDPRGDDIQQSLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARMIA EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHCC GKAVYVIDGAIVACFDAHIDRASTDALGEGIVGLIAEAADAREVTCVFRDSGFADDVAKV CCEEEEECCHHEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHH NLSAILEQHGVKRIRSL HHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLMGRMMQKLDAASPEAQSADLVAANVERLKALFPDVVTEGPDGASVNLDALAALVGAS CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC AAAAADADEKYGLNWHGKRRARRLALTPSTGTLRPCPRESAGWASTRNLMIEGENLEVLK HHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH LLQKSYAGRVKLVYIDPPYNTGKDFVYPDNFTDSLRHYLELTGQTTGGKRVTSHTDASGR HHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC FHTDWLNMIYPRLKLARDLLTEDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR EEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC NPKGDARGIAYQHESIVLFARDAERLFERAPLKRPKRNAQRMLGAAREAVAGAATIADAN CCCCCCCCEEEECCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC AAYRGWVKSQTTLSGGEAMYDRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPC HHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC PVPERGWRNPPATMRALIDKGLVEFGADETTQPQRIYFLDENMYENVPSVLPFGGSDDAL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCHHH MKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTAHAVMALNAADGGHRRYVL HHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEE VQLPEPLDADSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARIAAEHPGTRADLGFRV EECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE FRLDSTNVSEWDPRGDDIQQSLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARMIA EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHCC GKAVYVIDGAIVACFDAHIDRASTDALGEGIVGLIAEAADAREVTCVFRDSGFADDVAKV CCEEEEECCHHEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHH NLSAILEQHGVKRIRSL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]